BAC Information

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BAC

Clone NameB6Ng01-022O21
ChromosomeY (Build37)Y (Build37)
Map Location 1,120,586 - 1,120,787573,321 - 573,384
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O21.bB6Ng01-022O21.g
ACCDH854997DH854998
length907500
definitionDH854997|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O21, 5' end.DH854998|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,586 - 1,120,787)(573,321 - 573,384)
sequence
gaattcttctatttcactgttggttagaattccggtgtgtaaatttttat
tctaactctctttacccttagaaagtggtaggtattgatgaaaataccca
tatatttcagatattatatttgggcgagaataaggttttaaagtaagcct
ttatgattatctagattttctctatttctattattaagccccccttcatt
cctaactttgtaaattggatatatattctctctccttttcattgatttct
aatgctccttgatcgtgttaatataatttcattaattgctagtctttgtt
tttttttatatttttttattacgtattttcctcaattacatttccaatgc
tatcccaaaagaccccacacactccccccccaactcccctacccacccat
tcccattttttggctctggtgttcccctgtactggggcatataaagtttg
cctgaccaatgggcctctctttccagtgatgaccgactaggccatctttt
gatacatatgcagctaaggtcaagagctccgggtactggttagttcataa
tgttgttgcacctacagggttgcagatctctttagctccttggatacttt
ctctagcacctaccttgggggccctatgatccatccaatagttgactgtg
agcatccacttctgtgtttgctaggacccggactagtctcacaagagaca
gctatatcacagtccttgcaacaaacgcttgctagtgtatgcaatggtat
cattgattggaggctaattatgggatggatccctggatatggcagtctct
agatggtccatccttttgtcgcagctccaaactttgtctctgtaactcct
tccatgggtgattattttcaattctaagaagaggcaagtgtccacacttt
ggtcttc
gaattctcagttgaggaataccaaatggtcgagaagcacctaaagaaatg
tttaaccaaaagattgggaaaagatctttaccaatcatatcgatagggag
tagtatccaataaatataaagaactcaagaagttggactccagaaaacca
aataaccctattaaaaaggagggtacagagctaaataaagaattctaaac
tgaggaatactgaatggctgagaagcacccgaaaaaatgttcaacatcct
tagtcatcaggggaaatgcaaatcaaaacaaccctgagattccacctcat
accagtcagaatggctaagatcagattttattgaaaggacccagatgtag
ctgtctcttgtgagactatgccggagcctagcaaacacagaagtggatgc
tcacaatcagctaatggatggatcacagggctcccaatggaggagctaga
gaaagtacccaaggagctaaagggatctgcaaccctataggtggaacaac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120586_1120787
seq2: B6Ng01-022O21.b_344_545

seq1  TTTTTTTTTCCA-TTTTTTATTAGGTATTTAACTCATTTACATTTCCAAT  49
      |||||||||  | |||||||||| ||||||  |||| |||||||||||||
seq2  TTTTTTTTTATATTTTTTTATTACGTATTTTCCTCAATTACATTTCCAAT  50

seq1  GCTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACC  99
      ||||| |||||||  ||||| |  | ||| |||| |||||||| ||||||
seq2  GCTATCCCAAAAG-ACCCCACACACTCCCCCCCCAACTCCCCTACCCACC  99

seq1  CACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGT  149
      || ||||  |||||||| ||||| ||||||||||||||||||||||||||
seq2  CATTCCCATTTTTTGGCTCTGGTGTTCCCCTGTACTGGGGCATATAAAGT  149

seq1  TTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT  199
      ||||  | |||||||||||||||||||||||||| |||||||||||||||
seq2  TTGCCTGACCAATGGGCCTCTCTTTCCAGTGATGACCGACTAGGCCATCT  199

seq1  TTT  202
      |||
seq2  TTT  202

seq1: chrY_573321_573384
seq2: B6Ng01-022O21.g_503_566

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCT  50

seq1  ATAGATGGAACAAC  64
      |||| |||||||||
seq2  ATAGGTGGAACAAC  64