BAC Information

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BAC

Clone NameB6Ng01-031B02
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,570
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031B02.bB6Ng01-031B02.g
ACCDH860785DH860786
length1,136416
definitionDH860785|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B02, 5' end.DH860786|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatatgtgtatcaaccctgttatgtctccaagtacaataagctct
ttctttggagtcatccctcatttttgggtctttcaatcttttcacctatt
ccctaaacttgaagaaatctgtctgataaagacatcccattaagattgaa
tgctccaaagtccttgaactgctacacaacgtgcaatgtgggtttcagtg
ttctttcatcgattgttagaaagagtttccctgacaagagttcagtgatg
tacttttctatgtgtatagcaatgttattaagggtcattttattgtcatg
atcatttagcaaaataattatcataaatttctcttagagtccatgaacta
tctagtctcaggttcttgttttcattaagtgttagatatgagtttcatat
taggaggatatgggcctgaaatccaatcaaaatgtgattccttattccct
taaaatttgtgccactattgtaccagagggtatatattgcatataagtct
ctattgtagatctcagggctgtatattggtgagactgaatactacttttc
agataaagtagtatgtataataatttccaacactatgggaaagtgcttag
cccaagcttgatttctgcatgttgaatgacattaatatgcagtgtcttca
gctaccagaccttttggaaggtatccagtagcattaacaatagcctgtga
tatttggaagcaaagtctctgggacacatgttgatcaagaaatcaaaagg
atgtgacttattctaggcactagaagttttatttgatagcgtaagtggta
tagttagggcgtttgtttccacgttatatggtatcactacttaactccat
ttatataattttaaatttagaatactttcatagtagtgggtttctacatg
gctttcctttttgttattaattaattatttatttatttgcatcccaaatt
ttgctcccttcctggtcccctcccagagtctctctccatcatgctcctcc
tttcacctctgagaggtgatctctggtactccgtccatgaggctctagtt
cttaggattagtggaaactctcccactggagggcagaaaagttcgtcctg
ctgctattatgtgcaaagttctctaaaaacaatgca
tttatatatatattggatattagtcccctatccgatttgggataggtaaa
gatccttttccaatctgttggtggcctttttgtcttattgacggtgtctt
ttgctttgcagaagctttgcaattttatgaggtcccatttatcgattctg
atgatcacagtcagctattggatgggtcgaacggcccctaatggaggagc
tagagaaattacccaaggagctaaagggaactgcaaccctataggtggaa
caacaatatgaactaaccagtaccctggagctcttgtctttagctgcata
tgtatcaaaagatggcctagtcggccatcactgcaaagagaggacttgca
aactttatatgccccagtacaggggaaagccagggccaaaaagggggagt
gggtgggtaggggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870570
seq2: B6Ng01-031B02.g_270_486

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  CTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| ||||||||||||| |||||  ||||||||| || | |||||||
seq2  ACAACAATATGAACTAACCAGTACCCTGGAGCTCTTGTCTTTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||||||||||||||||||||||||||||| |||||||        
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGA--------  142

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAAGCCAGGGCCAAAA  192

seq1  AGGGGCAGTGGGTGGGTAGGGGAGT  225
      ||||| ||||||||||||||||| |
seq2  AGGGGGAGTGGGTGGGTAGGGGATT  217