BAC Information

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BAC

Clone NameB6Ng01-031D17
ChromosomeY (Build37)
Map Location 1,870,395 - 1,870,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031D17.bB6Ng01-031D17.g
ACCDH860907DH860908
length755212
definitionDH860907|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D17, 5' end.DH860908|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcggctctgagccccattcttttaatggggttatttgat
tttctggagtctaccttcttgagttgtttatatatatatatattggatat
tagtcccctatctgatttgggataggtaaagatcctttcccaatctgttg
gtggtctttttgtcttattgacagtgtcttttgccttgcagaagctttgc
aactttttgaggtcccatttatcgattctcgatcttacaacacaagccat
tgctgttctattcaggaattttttccctgtacccatatcttcgaggcttt
tccctactttctcctcaataagtttcagtgtctctggttttatgtggagt
tccttaatccacttagatttgaccttagtacaaggagatagaaactagca
agcgtttgatgcaaggaccatgatatagctgtctcttgtgagactaggcc
ggggcctagcaaacacagaagtggatgctcacagtcaactattggacgga
tcacagggcccccaatggaggagctagagaaagtgtccaaggagctaaag
agatctgcaacactgtaggtgcaacaacattatgaactaaccagtacccc
ggagctcttgactctagctgcatatgtatcaaaagatggcctagtcagcc
atcactggaaagagaggcccattggacaggcaaactttatatgccccagt
acagggggaacgccagggccaaaaaatgggaatgggtgggtaggggagta
ggaag
attgttaacaactgggatcaacaagggctccaccaacaacattatgaact
aaccagtaccccagagctcttgactctagctgcatatgtatcaaaagatg
gcctagtcggccatcaatggaaagagaggcccataggtcaggcaaacttt
atacgccccagtacaggggaacgccagggccaaaaaatgggaatgggtgg
gtaggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870395_1870572
seq2: B6Ng01-031D17.g_110_287

seq1  AACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCA  50
      ||||||||||||||||||||| |||||| |||||||||||||| ||||||
seq2  AACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTCTAGCTGCA  50

seq1  TAGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT  100
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATGTATCAAAAGATGGCCTAGTCGGCCATCAATGGAAAGAGAGGCCCAT  100

seq1  TGGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAA  150
       || || |||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGTCAGGCAAACTTTATACGCCCCAGTACAGGGGAACGCCAGGGCCAAA  150

seq1  AAGGGGCAGTGGGTGGGTAGGGGAGTGG  178
      ||  || | |||||||||||||||||||
seq2  AAATGGGAATGGGTGGGTAGGGGAGTGG  178