BAC Information

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BAC

Clone NameB6Ng01-035A21
ChromosomeY (Build37)3 (Build37)
Map Location 1,870,513 - 1,870,575132,004,190 - 132,004,393
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035A21.bB6Ng01-035A21.g
ACCDH863629DH863630
length82204
definitionDH863629|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A21, 5' end.DH863630|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,870,513 - 1,870,575)(132,004,190 - 132,004,393)
sequence
agtcaagatagtaacaaacatgccccaatacaggggaacgccagggccaa
aaagggggagtggatgggtaggggagtggggg
aaacatttttaaattgaatctcttactgtttttgagaacatacatgaata
ttgtgtttacatcatttcacccctctctctgtccaattctttgtcccccc
aactccctctcaaattcacaacatctctgtttttagttattatcgactca
ctcaggagtgcattctctctctctctctctctctctctctctctctctct
ctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870513_1870575
seq2: B6Ng01-035A21.b_68_130

seq1  ATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTGGGTGGGT  50
      |||||||| ||||||||||||||||||||||||||||| ||||| |||||
seq2  ATGCCCCAATACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGATGGGT  50

seq1  AGGGGAGTGGGGG  63
      |||||||||||||
seq2  AGGGGAGTGGGGG  63

seq1: chr3_132004190_132004393
seq2: B6Ng01-035A21.g_72_275 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGCACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGCACTCC  50

seq1  TGAGTGAGTCGATAATAACTAAAAACAGAGATGTTGTGAATTTGAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGTCGATAATAACTAAAAACAGAGATGTTGTGAATTTGAGAGGG  100

seq1  AGTTGGGGGGACAAAGAATTGGACAGAGAGAGGGGTGAAATGATGTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGGGGACAAAGAATTGGACAGAGAGAGGGGTGAAATGATGTAAAC  150

seq1  ACAATATTCATGTATGTTCTCAAAAACAGTAAGAGATTCAATTTAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTCATGTATGTTCTCAAAAACAGTAAGAGATTCAATTTAAAAAT  200

seq1  GTTT  204
      ||||
seq2  GTTT  204