BAC Information

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BAC

Clone NameB6Ng01-037E24
ChromosomeY (Build37)
Map Location 1,261,445 - 1,261,819
singlet/doubletsinglet
Overlap genenone
Upstream geneJarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079
Downstream geneLOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E24.bB6Ng01-037E24.g
ACCDH865228DH865229
length1,165369
definitionDH865228|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E24, 5' end.DH865229|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagacactgatacttatagaagagaaagtggg
gaaaagcgttgaagatattggcacacgggataaattcctgaatagaacag
caatggcttgtgctgtaagatcaataattgacaaatgggaccacatgaaa
ctgcaaagcttctgtaaggcaaaagacaccgtcaataaggcaaaaaggcc
accaccagattgggaaagtatctttacctttcctaaatcagatagaggac
taatatacaatatatatatatatatggaactcaagaaggtagactccaga
aaatcaaataaccctattaaaaatgaggctctgagccaaacaaagaattc
tcatctgaggaataccgaatggctgagaaacacctgaaaaaaaatgttca
gcatccttaatcatcagggaaatgcaaatcaaaacaaccctcagattcca
ttcacaccagtcagaatggctaagatcaaaaattcaggtgacagcagatg
ctggcaaggatgtggagaaagaggaacactcctccattgttggtggagtt
gcaagcttgtacaaccactctggaaatcagtttggcggttcctcagaaaa
ttggacatcgtactaggggaggatcccaaaatacctctcctgggcatata
tccagaagatgttccaactcgtaagaaagaaacatgctccactatattca
tagcagccttatttataatagccagaagctgggaaaacccagatgcccct
cacagaggaatggatataaaaaatgtggtacattacacagtggagtacta
ctcagcttaataaacaatgaatttatgaaattcctaggcaaatgggttga
acctggagggcattatccctgattgaggtaacccaatcacaaaaatcaat
tgatatgtactcactgataaatggatattagcccagaaactttaattacc
caatgattatagttaccattttgcaaaaacactggaaacctgaattaaga
actgaagacctagtgtggtacatcttggcccccttcctttgattggggaa
caatctacccaaggtagggagtttacagagaacaaagtttgggagctgta
aaactaaatggatggacacatctttagatgacgtgcattatttcagggat
ccctctcctttacaa
aaggaaccaaagccagtcttctgggagtgcaaaagtgctcttgaccactg
aatcatctctctagtctcataaagatatcttttaaagaaatacaatattc
acatgcagaaaagagaccaggatgagggtaagaaagatcaaattgctggt
gatcttgaaaaagaataaaggacacacaaaggagtagaggacactggggg
acaaattaattccaagatggagttctcaaaaattgaagcaggagacccag
gaagaatagtaagtttctggaaatagttaaaattgtaccatattcacatt
gtcttctttgctttcttaacaaacagtcagcccatcattacagaaggatg
ttgggggtggggttgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1261445_1261819
seq2: B6Ng01-037E24.g_68_442

seq1  GAATTCAAGGAACCAAAGCCAGTCTTCTGGGAGTGCAAAAGTGCTCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAACCAAAGCCAGTCTTCTGGGAGTGCAAAAGTGCTCTTGA  50

seq1  CCACTGAATCATCTCTCTAGTCTCATAAAGATATCTTTTAAAGAAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAATCATCTCTCTAGTCTCATAAAGATATCTTTTAAAGAAATACA  100

seq1  ATATTCACATGCAGAAAAGAGACCAGGATGAGGGTAAGAAAGATCAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACATGCAGAAAAGAGACCAGGATGAGGGTAAGAAAGATCAAATT  150

seq1  GCTGGTGATCTTGAAAAAGAATAAAGGACACACAAAGGAGTAGAGGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGATCTTGAAAAAGAATAAAGGACACACAAAGGAGTAGAGGACAC  200

seq1  TGGGGGACAAATTAATTCCAAGATGGAGTTCTCAAAAATTGAAGCAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGACAAATTAATTCCAAGATGGAGTTCTCAAAAATTGAAGCAGGAG  250

seq1  ACCCAGGAAGAATAGTAAGTTTCTGGAAATAGTTAAAATTGTACCATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGAAGAATAGTAAGTTTCTGGAAATAGTTAAAATTGTACCATATT  300

seq1  CACATTGTCTTCTTTGCTTTCTTAACAAACAGTCAGCCCATCATTACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGTCTTCTTTGCTTTCTTAACAAACAGTCAGCCCATCATTACAGA  350

seq1  AGGATGTTGGGGGTGGGGTTGTAGA  375
      |||||||||||||||||||||||||
seq2  AGGATGTTGGGGGTGGGGTTGTAGA  375