BAC Information

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BAC

Clone NameB6Ng01-042D06
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042D06.bB6Ng01-042D06.g
ACCDH868647DH868648
length1,037458
definitionDH868647|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D06, 5' end.DH868648|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggaatttttagagtcatttatatatactatcatatcgt
catcaaaaagtgatattttgacttcttcctttccaatttgtatccccttt
atctccttttgttgtgtaattgctctggctaggacttctagtacaaggtt
gaataggtagggagaaagtggacagccttgtctagtccctgattttagtg
ggattgcatccaggttctgaccatttactttgatgtcggctactggtttg
ctgtagattgcttttatcatgtttaggtatgggctttgaattcctgattt
ttccaagacttttatcatgaatgggtgttggattttgccaaatgcttact
cagcatataacgagattatcatgtggtttctgtctttgagtttgtttata
taatggattacattgatgtatttccatatattaaaccattcctgaatccc
tggaatgaaacctacttggtcaggatggatgattgttttgatgtgttctt
ggatttggctagcaagaattttattgagtatatttgcatcgatattcata
agagaaattggtctgaagttctctatctttgttggatctttctgtggttt
aggtatcacagtaattgtggcttcatagaatgaattgggtagggtacctt
ctgcttctattttgtggaataatttgtgaaaaactggaattaaatcttct
ttgaaggtctgatagaactctgtactaaacccatctggtcctggactttt
ttttgttgggagactattaatgactgcttctatttctttaggggatatag
gactgtttaaatcattaacctgatcctgatttaactttggttcctggtat
ctgtccagaaatttgtctatttcattcagttttccagttttgttgagtat
agctttttgtagaaagatctgatgggttttggatttctccagatctgttg
ttagtcccctttcattctgattgtaaatgggaggctgccctggctcctat
gattctgggaaggttactatctgtgttttcttagaaa
tgtttacctcttatctccatttttaaataggaccatctagagcctgccat
atccagggatccatcccataattagcttccaaacgctgacaccattgcat
atactagcaagattttgctgaaaggacccagatatagctgtctcttgtga
gactatgccagggcctagcaaacacagaagtggatgctcacagtcagcta
ttggatggatcacagggcccccaatggaggagctagagaacgtatccaag
gagctaaagagatctgcaaccctgcaggtgcaacaacattatgatctaat
cagtaccccggagctcttgactctagctgcatatgtatcaaaagatggcc
tagttggccatcactgcaaagagaggcccattggacaggcaaactttata
tgccccagtacaggggaatgccagggccaaaaaatgggaatgggtgggta
ggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870571
seq2: B6Ng01-042D06.g_305_530

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||| ||| |||||||||||||| |||||||||||||  ||||| |
seq2  CTAGAGAACGTATCCAAGGAGCTAAAGAGATCTGCAACCCTGCAGGTGCA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||| |||| || |||||| |||||||||||||| |||||||
seq2  ACAACATTATGATCTAATCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACAGGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTG  226
      |  || | ||||||||||||||||||
seq2  AATGGGAATGGGTGGGTAGGGGAGTG  226