BAC Information

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BAC

Clone NameB6Ng01-053A03
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,411
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053A03.bB6Ng01-053A03.g
ACCDH876185DH876186
length1,153471
definitionDH876185|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A03, 5' end.DH876186|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttggaattttgatggggattgcattgaatctgtagattgcttttggcaag
atagccatttttacaatgttgatcctgccaatccatgagcatgggagatc
tttccatcttctgagatcttctataaattcttattcagagacttgaagtt
tttatcatacagatctttcacttccttagttagagtcacgccgagatatt
ttatattatttgtgactattgaaaagggtgttgtttccctaatttctttc
tcagcctgtttattctttgtgtagagaaaggcccttgacttgtttgagtt
aattttatatccagctacttcaccgaagctgtttatcaggtttaggagtt
ctctggtggaatttttagggtcacttatgaatactaccatatcatctgca
aaaagtgatattttgagttcctcttttccaatttgtatcctcttgatctc
cttttgttgtcgaattgctctggctagtacttcaagtactatgttgaaaa
ggtagggtgaaagtgggcagccttgtatagtccctgattttagtgggatt
gcttccagcttctctccatttactttgatgttggctactggtttgctgta
gattgcttttattatgtttaggtatgggccttgaattcctgatctttcca
aaacttttatcatgaatgggtgttggatcttgtcaaatgctttttctgca
tctaacgagatgatcatgtggtttttgtctttgagtttgtttatataatg
gattacattgatggattttcgtatattaaaccatccctgcattcctggaa
taaagcctacttgttcaggatggatgattgctttattatgttcttggatt
cggttagcaagaattttattgaggatttttgcatcgatattcataagaga
aattggtctgaagttctctatctttgtgatctttctgtgggttaggtatc
agagtaatagtgcttcataaaatgagtgggtagaatacctcctacttcaa
tcttgtgaatagtgttgtgcatactgaaatagattctttcttgagggctg
ataaacctgcgaccaacccgctcgtcctgggctttttgcgcgggagacat
tggtacggctcttttctaaggatgggacgcttagaatgcactgatcgaat
cac
gaattcacacaatatgtactcactgataagtagatatcagcccagaaact
taggatacccaagatataagatacaatttgctaaacgcacgaaactcaag
aacgaagaccaaagtgtggacaatttgccccttcttagaattgggaacaa
aacacccatggacggagttacagagccaaaatttgaagctgttaggaaag
gatggaccatcttgtgattgccatatccgggatccatctcataatcagct
tccaaacgctgacaccattgcatacactagcaagattttgctgaaaggac
ccagatatagctgtctcttgtgagactatgcaggggcctagcaaacacag
aagtggatgctcacagtaagctattggatggatcacagggcccctaatgg
aggagctagagaaagtacccaaggagctaaagggatctgcaactgtatag
gtggaacaacagtatgaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870411
seq2: B6Ng01-053A03.g_471_536

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACTGTATAGGTGGA  50

seq1  ACAACATTATGAACTA  66
      |||||| |||||||||
seq2  ACAACAGTATGAACTA  66