BAC Information

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BAC

Clone NameB6Ng01-053I03
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,469
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053I03.bB6Ng01-053I03.g
ACCDH876537DH876538
length1,126500
definitionDH876537|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I03, 5' end.DH876538|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccacttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttgagatttgaagttttatcatacag
atctttcacttccttagtttggagtcacgccgagatattttatattattt
gtgactattgagagggtgtgttttccctatttcttttctcaagctgttat
tctcttgtgatgagaaaaggcattgaccttgtttagtaatttattatcca
ctacttctcgaacttgttgttctggtttgagaattctcggtgggaatttt
ttagggtccctttaatatcatataca
gaattctttctgtgacctaggatacccaagatataagatataatttgcta
aacacacgaaactcaaggagaatgaagactgaagtgtggacactatgccc
ctccttagatttgggaacaaaacacccatggaaggagttacagagacgga
gtttggagctgagatgaaaggatggaccatgtagagactgccatagccag
ggatccaccccataatcagcatccaaacgctgacaccattgcatacacta
gcaagattttattgaaaggacgcagatgtagctgtctcttgtgagactat
gccggggcccagcaaacacagaagtggatgctcacagtcagctaatggat
ggatcatagggctcccaatggaggagctagagaaagtagccaaggagcta
aagggatctgcaaccctataggtggaacaacattatgagctaaccagtac
cccggagctcttgactctagctgcatatatatcaaaagatggcctagtcg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870469
seq2: B6Ng01-053I03.g_444_567

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||| ||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCG  124
      |  |||||||||||||||||||||
seq2  ATATATCAAAAGATGGCCTAGTCG  124