BAC Information

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BAC

Clone NameB6Ng01-062G24
ChromosomeY (Build37)15 (Build37)
Map Location 573,321 - 573,43766,563,701 - 66,564,417
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062G24.bB6Ng01-062G24.g
ACCDH882834DH882835
length499717
definitionDH882834|Mus musculus domesticus DNA, BAC clone: B6Ng01-062G24, 5' end.DH882835|Mus musculus domesticus DNA, BAC clone: B6Ng01-062G24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,437)(66,563,701 - 66,564,417)
sequence
gaattctttgttcagctctgagccccattttttaatgtggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcatttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgtgacgaaaggatggaccatctagt
gattgccatatgcagggatccatcccataatcagcttccaaatgatgaca
ccattgcatacactagcaagattttgctgaaaggactcagatatagctgt
ctcttgtgagactatgctggggcctagcaaacacagaagtggatgatcac
agtcagctattggatggatcacacggcccccaatggaggagctagagaaa
ttacccaaggagctaaagggatctgcaaccctataggtggaacaacatta
tgaactaaccagtaccccggagctcttgtctctagctgcatatgcatca
gaattccaaagtgtcagagatgccaagcaatttgctgcaataaccacaga
tgacttgaaagcattttctgctttcaggagtttgacctgcattccctggg
ttgtttgcctcagcaggtggtccaaaggatcatgaaaataacactgaaaa
gcagactttggtgtgcttcctgtttaaaggaagtggagtctactgagttg
tagattcctaaactaggaccctacccacattagctttcgatatcagatct
aagcctggataaccttggtccaggtctctgctttattcaactgtgacatt
agtagctagctgataaacaaaagaaatgcaccctactgaggattgccatg
ggacatacaagtgaatgaccagatagttggaacttggaaaaaaaaatccc
cagtttagaacatacactcacacacacacacacacacacacacacacaca
catcagatatatatatatatatatatatatatatatatatatatatatac
atactcacatacaccacatatatacatacacagataccacacatacaaca
tcacacacacacatatatatacacatgcacacgcacacacacatatgtgt
gtgtgtgtgtatatatatatcacagaccccacacacatatctcccacacc
acacaaacatacacatagaacatcacacacagacacatcacacacacaca
catatacacacacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573437
seq2: B6Ng01-062G24.b_432_548

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  ATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGATCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| |||||||||| |||||| ||||||||| || | |||||| |||||
seq2  ATAGGTGGAACAACATTATGAACTAACCAGTA-CCCCGGAGCTCTTGTCT  99

seq1  CTAGCTGCATATGTATCA  117
      ||||||||||||| ||||
seq2  CTAGCTGCATATGCATCA  117

seq1: chr15_66563701_66564417
seq2: B6Ng01-062G24.g_68_784 (reverse)

seq1  GTGTGTGTGTGTATGTGTGTGTGTGTGTGATGTGTGTGTGTGTGATGTTC  50
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  GTGTGTGTGTGTATATGTGTGTGTGTGTGATGTGTCTGTGTGTGATGTTC  50

seq1  TATGTGTATGTTTGTGTGGTGTTGGAGATATGTGTGTGGGGTCTGTGATA  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATGTGTATGTTTGTGTGGTGTGGGAGATATGTGTGTGGGGTCTGTGATA  100

seq1  TATATATACACACACACACACATATGTGTGTGTGCGTGTGCATGTGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACACACACACACACATATGTGTGTGTGCGTGTGCATGTGTATA  150

seq1  TATATGTGTGTGTGTGATGTTGTATGTGTGGTATCTGTGTATGTATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGTGTGTGATGTTGTATGTGTGGTATCTGTGTATGTATATAT  200

seq1  GTGGTGTATGTGAGTATGTATATATATATATATATATATATATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTATGTGAGTATGTATATATATATATATATATATATATATATATA  250

seq1  TATATATATATCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  300

seq1  GTGTATGTTCTAAACTGGGGATTTTTTTTTCCAAGTTCCAACTATCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTTCTAAACTGGGGATTTTTTTTTCCAAGTTCCAACTATCTGGT  350

seq1  CATTCACTTGTATGTCCCATGGCAATCCTCAGTAGGGTGCATTTCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTTGTATGTCCCATGGCAATCCTCAGTAGGGTGCATTTCTTTTG  400

seq1  TTTATCAGCTAGCTACTAATGTCACAGTTGAATAAAGCAGAGACCTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGCTAGCTACTAATGTCACAGTTGAATAAAGCAGAGACCTGGAC  450

seq1  CAAGGTTATCCAGGCTTAGATCTGATATCGAAAGCTAATGTGGGTAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTATCCAGGCTTAGATCTGATATCGAAAGCTAATGTGGGTAGGGT  500

seq1  CCTAGTTTAGGAATCTACAACTCAGTAGACTCCACTTCCTTTAAACAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTTAGGAATCTACAACTCAGTAGACTCCACTTCCTTTAAACAGGA  550

seq1  AGCACACCAAAGTCTGCTTTTCAGTGTTATTTTCATGATCCTTTGGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACCAAAGTCTGCTTTTCAGTGTTATTTTCATGATCCTTTGGACCA  600

seq1  CCTGCTGAGGCAAACAACCCAGGGAATGCAGGTCAAACTCCTGAAAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGAGGCAAACAACCCAGGGAATGCAGGTCAAACTCCTGAAAGCAG  650

seq1  AAAATGCTTTCAAGTCATCTGTGGTTATTGCAGCAAATTGCTTGGCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTTTCAAGTCATCTGTGGTTATTGCAGCAAATTGCTTGGCATCT  700

seq1  CTGACACTTTGGAATTC  717
      |||||||||||||||||
seq2  CTGACACTTTGGAATTC  717