BAC Information

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BAC

Clone NameB6Ng01-062O13
Chromosome10 (Build37)Y (Build37)
Map Location 123,905,596 - 123,906,622573,584 - 573,641
singlet/doubletsingletsinglet
Overlap gene4930503E24Rik
Upstream geneAI851790
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062O13.bB6Ng01-062O13.g
ACCDH883161DH883162
length1,140569
definitionDH883161|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O13, 5' end.DH883162|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(123,905,596 - 123,906,622)(573,584 - 573,641)
sequence
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccatgacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgatggtaaccgtcctgggttttctcgtcccaggatttctcgtcct
gggtcttctcgtcccgggtcttctcgtcccgggtctcagcaccaactttt
acacgcgttctcgcgaccggccaggaaagacgcagcaaaccggaatcttc
tgcggcaaagctttattgcttacatcttcaggagcaagagtgcaagagag
caagagctctattgcttacatctttaggagccagagcgcaagagcgcaag
agagcaagagctttattgcttacatcttcaggagcaagaagcaagagaga
gaatggcgaaaccctgtcccttttaaggagaattatcctccgcctaggac
gtattactccctgattggctgcagcccatcggcccagttgtcatcacggg
aaaggcagaacacatggcgggaaaactgcccctgcacgtgtgcagattat
gtttaccacttagaacacagctgtcagcgccatcttataatggcaaatgt
gagggcggcttcctacatacgttggccattgtgacgtaccctaggtagtg
gctccattccatggaggctactcagatactggaaaaccaggaagcagaga
accttggtaattactggaagtggttgtgaactctgagtattgttttcagc
tatcatttattcattcaggttgccattttccctaagctctacgtacctat
taacttggtcctcaccaaaacttagcatacttcgattccaattgttcatt
gaaatttacagtgctaggcagtttatgtcattcctcatcactgccaatga
tagaaaacagtggaaagaaagtaacagaagagccacactgtgtctcatac
actgctgggctctacagtctatcttacataccttctagacccggtttact
gacttctaggttatcttcgtcctagttctgaacaaatggaccaggaccct
tgacaggtgtatcataatacagttaaagaaaatggaacgacttaaaccat
tcttatatgttaggcgttggtgctgacttgctctactaga
gaattccttttggaaggtcgttcaagaaaaattgaaaactgattagtctt
aagaaaaataggaggaacaagaatatgaactaaccagtactccccagagc
ttgtgtctctagttgcatatgtagcagaggatggcctagtcggccatcaa
tgggtggagaggcctttggtcttgtaaagattatatgctccagtacagga
gaatgctagggcctggaagcaggagtgtatgaattggggagcagggtggg
gagaggatatagagaactttcagagaggagactaggaaaggggatagcat
ttgaaatgtaaatgaagaaaatatctaataaaaaacaaaacaaataaaat
ctagctatagcatatgttgtccagtctctgtatgttgagaaaatgcaggc
ttaaatgaaatcccagatggaaaaattctgaaatgctagatgaaccaagt
tcctctgggatcagcagcctttcctgaagctgttctggaagcaagggtcc
tgaggaaatagcaacagtctgagactaatctgtgcatcctagcctcttct
agggtggatgttgctaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123905596_123906622
seq2: B6Ng01-062O13.b_167_1185

seq1  GGTTTTCTCGTCCCAGGATTTCTCGTCCTGGGTCTTCTCGTCCCGGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTCGTCCCAGGATTTCTCGTCCTGGGTCTTCTCGTCCCGGGTCT  50

seq1  TCTCGTCCCGGGTCTCAGCACCAACTTTTACACGCGTTCTCGCGACCGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTCCCGGGTCTCAGCACCAACTTTTACACGCGTTCTCGCGACCGGC  100

seq1  CAGGAAAGACGCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGACGCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTT  150

seq1  ACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTATTGCTTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTATTGCTTACAT  200

seq1  CTTTAGGAGCCAGAGCGCAAGAGCGCAAGAGAGCAAGAGCTTTATTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGAGCCAGAGCGCAAGAGCGCAAGAGAGCAAGAGCTTTATTGCTT  250

seq1  ACATCTTCAGGAGCAAGAAGCAAGAGAGAGAATGGCGAAACCCTGTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAGGAGCAAGAAGCAAGAGAGAGAATGGCGAAACCCTGTCCCT  300

seq1  TTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTG  350

seq1  CAGCCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACATGGCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACATGGCGGG  400

seq1  AAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGC  450

seq1  TGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTTCCTACATACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTTCCTACATACG  500

seq1  TTGGCCATTGTGACGTACCCTAGGTAGTGGCTCCATTCCATGGAGGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATTGTGACGTACCCTAGGTAGTGGCTCCATTCCATGGAGGCTAC  550

seq1  TCAGATACTGGAAAACCAGGAAGCAGAGAACCTTGGTAATTACTGGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACTGGAAAACCAGGAAGCAGAGAACCTTGGTAATTACTGGAAGT  600

seq1  GGTTGTGAACTCTGAGTATTGTTTTCAGCTATCATTTATTCATTCAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAACTCTGAGTATTGTTTTCAGCTATCATTTATTCATTCAGGTT  650

seq1  GCCATTTTCCCTAAGCTCTACGTACCTATTAACTTGGTCCTCACCAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTTCCCTAAGCTCTACGTACCTATTAACTTGGTCCTCACCAAAAC  700

seq1  TTAGCATACTTCGATTCCAATTGTTCATTGAAATTTACAGTGCTAGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATACTTCGATTCCAATTGTTCATTGAAATTTACAGTGCTAGGCAG  750

seq1  TTTATGTCATTCCTCATCACTGCCAATGATAGAAAACAGTGGAAAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCATTCCTCATCACTGCCAATGATAGAAAACAGTGGAAAGAAAG  800

seq1  TAACAGAAAGAGCCACACTGTGTCTCATACACTGCTGGGCTCTACAGTCT  850
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAG-AAGAGCCACACTGTGTCTCATACACTGCTGGGCTCTACAGTCT  849

seq1  ATCTTACATAACCTTCTAGACCCGGTTTACTGACTTCTA-GTTATCTTCG  899
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  ATCTTACAT-ACCTTCTAGACCCGGTTTACTGACTTCTAGGTTATCTTCG  898

seq1  TCCTAGTTCCTGAACAAATGGACCCAGACCCTTGACAAGTGTAATCATAA  949
      |||||||| |||||||||||||||  ||||||||||| |||| |||||||
seq2  TCCTAGTT-CTGAACAAATGGACCAGGACCCTTGACAGGTGT-ATCATAA  946

seq1  TACAGTTAAAAGAAAAATGAAAACGACTTAAAACACATTCTATAATGTTA  999
      ||||||||||   ||||||  |||||||||||   ||||||   ||||||
seq2  TACAGTTAAA--GAAAATG-GAACGACTTAAA--CCATTCTTATATGTTA  991

seq1  AGCGTTGGGTGCTGACTTGCTC-ACTAGA  1027
       ||||| ||||||||||||||| ||||||
seq2  GGCGTT-GGTGCTGACTTGCTCTACTAGA  1019

seq1: chrY_573584_573641
seq2: B6Ng01-062O13.g_359_418

seq1  GGGATAGCATTTGAAATGTAAATGAAGAAAATAACTAATAAAAAATTTA-  49
      ||||||||||||||||||||||||||||||||| |||||||||||   | 
seq2  GGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAACAAAA  50

seq1  -AAATAAAAT  58
       |||||||||
seq2  CAAATAAAAT  60