BAC Information

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BAC

Clone NameB6Ng01-063B09
Chromosome12 (Build37)Y (Build37)
Map Location 120,631,565 - 120,632,674385,670 - 385,744
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011
Downstream gene4732474O15Rik, LOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063B09.bB6Ng01-063B09.g
ACCDH883287DH883288
length1,087835
definitionDH883287|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B09, 5' end.DH883288|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(120,631,565 - 120,632,674)(385,670 - 385,744)
sequence
gaattctgaaataggaaaaatgttaaacataaaaatctggcattttctgt
atgttttgggcaagaagggatgttgagtattctatagagaggccagtggg
agatttgggacaatagctctgaaatcggattgactatggaaacttaaaga
gatgtgaacttctagataacagagtattcaaaagtgtcctaactcagtga
cttacaaacattatcttagaagtatcttaggagccttgcattcctcagca
gatgcatccaggagatagcatgcaggtgagctggggaatagacagcagag
atataatggaactcatgaaaacagactggcacttttagcatggataaaga
ggagtccaacagataaggagagtggcacaggtgtgtatatatacatgtgc
actgagatgtacatacatgtgaaggttaggcattggtggcagttttctgc
ctttatcacactttcttccttattttttgacactacgtttcttattgaac
ctagtgttcactggtctggacctaatacgtaaagtccttaatgtacaagc
acaaaaacctgtttcacagtaaagacctgtttgggatgcagagacatgca
gatccccagagcttattggcaaacagtctagccaaatcagtatacacatg
tacctgtgcacactacctccccccaacacacactcatagagaaatgaggg
tataatcaatccataagaatgttgaacaataatgacaaagttttcaagct
tgaaagcttaaaagagaatgactaacactgtaggccattggaaattgaga
gaaataaatctgtaagctgaaagggaaactacagtgttcatcatgagaaa
aggtagttacagtgcagccagagcatggcaggacagtgaatgccacccac
agaacgaaacctagcctattcttcaccccgtcccactggggctttgggga
agaaactgagaaaaaaaatcctccagtgtatagagatattggagctggtg
aagaccactttatctatgataagttctctgggtctctctgatacttgact
acttgctcagaggtgtatgatgcttcaaatcaggata
gaattcactctgtagatcaggctggcctcaaactcagagatctgcctgcc
tctgcctactgagtgctggaattaaaggcatcgaccaccaacacttgtct
cgtaatatgtaagttattgaaatgaaatctaagtaactatcagaagggtt
tattgggtgggttgtttttatgttgttgtttcttaactgattatttcatt
tatttacatttcaaatgttatcccccttttctgatttcccacccccaccc
cagcaagtcccttaccccatccccagtaccccctgcttctatgagggtgc
tccctcacccacctgcccgctcccaccttactgccctagcattcccctac
acttggtcattgatcttccacaggaccaagggggctcccctcccgttgat
gccagataaggcaatcctcttctacatctgcagctggaaccatgggtccc
tttgtgtgtactctttggttggtagtttagtccctgagagctctgggcgg
ggggagggtctagttggttgatatcgttgttccgattggattgcaaaccc
tgtcagctccttcagtccttcccctaactcctccattagggtccctgtgc
tcagtcccatgatttgctgcaagcatccacatctgtattggtcagggttt
ggtagagcctatcaggggatagctataccagattcctgtcagcaagtgct
tcttggcatcagcaatagtgtctgggtttggtgtctgcagattagatgga
tccctaggtggggcagtctctggatgccctttctttagtctctattccac
tctttgtccctgcatttccttagaaagaacaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120631565_120632674
seq2: B6Ng01-063B09.b_47_1133

seq1  GAATTCTGAAATAGGAAAAATGTTAAACATAAAAATCTGGCATTTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAATAGGAAAAATGTTAAACATAAAAATCTGGCATTTTCTGT  50

seq1  ATGTTTTGGGCAAGAAGGGATGTTGAGTATTCTATAGAGAGGCCAGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGGGCAAGAAGGGATGTTGAGTATTCTATAGAGAGGCCAGTGGG  100

seq1  AGATTTGGGACAATAGCTCTGAAATCGGATTGACTATGGAAACTTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGGACAATAGCTCTGAAATCGGATTGACTATGGAAACTTAAAGA  150

seq1  GATGTGAACTTCTAGATAACAGAGTATTCAAAAGTGTCCTAACTCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAACTTCTAGATAACAGAGTATTCAAAAGTGTCCTAACTCAGTGA  200

seq1  CTTACAAACATTATCTTAGAAGTATCTTAGGAGCCTTGCATTCCTCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACATTATCTTAGAAGTATCTTAGGAGCCTTGCATTCCTCAGCA  250

seq1  GATGCATCCAGGAGATAGCATGCAGGTGAGCTGGGGAATAGACAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATCCAGGAGATAGCATGCAGGTGAGCTGGGGAATAGACAGCAGAG  300

seq1  ATATAATGGAACTCATGAAAACAGACTGGCACTTTTAGCATGGATAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGGAACTCATGAAAACAGACTGGCACTTTTAGCATGGATAAAGA  350

seq1  GGAGTCCAACAGATAAGGAGAGTGGCACAGGTGTGTATATATACATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCAACAGATAAGGAGAGTGGCACAGGTGTGTATATATACATGTGC  400

seq1  ACTGAGATGTACATACATGTGAAGGTTAGGCATTGGTGGCAGTTTTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATGTACATACATGTGAAGGTTAGGCATTGGTGGCAGTTTTCTGC  450

seq1  CTTTATCACACTTTCTTCCTTATTTTTTGACACTACGTTTCTTATTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCACACTTTCTTCCTTATTTTTTGACACTACGTTTCTTATTGAAC  500

seq1  CTAGTGTTCACTGGTCTGGACCTAATACGTAAAGTCCTTAATGTACAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTTCACTGGTCTGGACCTAATACGTAAAGTCCTTAATGTACAAGC  550

seq1  ACAAAAACCTGTTTCACAGTAAAGACCTGTTTGGGATGCAGAGACATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACCTGTTTCACAGTAAAGACCTGTTTGGGATGCAGAGACATGCA  600

seq1  GATCCCCAGAGCTTATTGGCAAACAGTCTAGCCAAATCAGTATACACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAGAGCTTATTGGCAAACAGTCTAGCCAAATCAGTATACACATG  650

seq1  TACCTGTGCACACTACCTCCCCCCAACACACACTCATAGAGAAATGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTGCACACTACCTCCCCCCAACACACACTCATAGAGAAATGAGGG  700

seq1  TATAATCAATCCATAAGAATGTTGAACAATAATGACAAAGTTTTCAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCAATCCATAAGAATGTTGAACAATAATGACAAAGTTTTCAAGCT  750

seq1  TGAAAGCTTAAAAGAGAATGACTAACACTGTAGGCCATTGGAAATTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTTAAAAGAGAATGACTAACACTGTAGGCCATTGGAAATTGAGA  800

seq1  GAAATAAATCTGTAAGCTGAAAGGGAAACTACAGTGTTCATCATGAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAATAAATCTGTAAGCTGAAAGGGAAACTACAGTGTTCATCATGAG-AA  849

seq1  AAGGTAGTTACAGTGCAGCCAGAGCATGGCAGGAACAGTGAATGCCACCC  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAGGTAGTTACAGTGCAGCCAGAGCATGGCAGG-ACAGTGAATGCCACCC  898

seq1  ACAAGAACGAAACCTAGCCTATTCTTCACCCCGTCCCACTGGGGCTTTTG  950
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AC-AGAACGAAACCTAGCCTATTCTTCACCCCGTCCCACTGGGGC-TTTG  946

seq1  GGGAAGAAAACTGAAGAAAAAAAAATCCTCCAGGTGTATAGAGATATTGG  1000
      |||||| |||||||   ||||||||||||||| |||||||||||||||||
seq2  GGGAAG-AAACTGA--GAAAAAAAATCCTCCA-GTGTATAGAGATATTGG  992

seq1  AAGCTGGTGGAAAGACACAACTTTATCTAATGATAAAGTTCTCTGGGGTT  1050
       ||||||||  |||  || ||||||||| ||||| ||||||||||||  |
seq2  -AGCTGGTG--AAG--ACCACTTTATCT-ATGAT-AAGTTCTCTGGG--T  1033

seq1  CTCTCTTGATTACTTTGACTACCTTGCTCAGAGGTGTATGATGCTTCAAT  1100
      ||||| ||| ||| ||||||| ||||||||||||||||||||||||||| 
seq2  CTCTC-TGA-TAC-TTGACTA-CTTGCTCAGAGGTGTATGATGCTTCAA-  1078

seq1  ATCCAGGATA  1110
      || |||||||
seq2  AT-CAGGATA  1087

seq1: chrY_385670_385744
seq2: B6Ng01-063B09.g_70_144

seq1  TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTG  50
      |||||||||||| |||||||||||| |||||||| |||||||||||||||
seq2  TCACTCTGTAGATCAGGCTGGCCTCAAACTCAGAGATCTGCCTGCCTCTG  50

seq1  CCTCCCGAGTGCTGGGATTAAAGGC  75
      ||| | ||||||||| |||||||||
seq2  CCTACTGAGTGCTGGAATTAAAGGC  75