BAC Information

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BAC

Clone NameB6Ng01-068A13
ChromosomeY (Build37)
Map Location 1,120,579 - 1,121,036
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068A13.bB6Ng01-068A13.g
ACCDH886743DH886744
length9331,212
definitionDH886743|Mus musculus domesticus DNA, BAC clone: B6Ng01-068A13, 5' end.DH886744|Mus musculus domesticus DNA, BAC clone: B6Ng01-068A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattttaatcaatagttgaatggttactccagctgatttctttt
ttttttctttccatttttattaggtatttagctcatttacatttccaatg
ctataccaaaagtcccccatacccacccacccccacttccctacccgaca
actccccctttttggacctggcattcccctgttttgtggcatataaagtt
tgcgtgtccaatgggcctctctttccagtgatggccgactaggccatctt
ttgatacatatgcagctagagtcaagagctccggggtactggttagttca
taatgttgatccacctaaagggttgcagatccctttagctccttgggtac
tttctctagctcctccattgggagcatgtgatccatccattagctgactg
tgagcatccacttctgtgtttgctaggccctggcatagtctcacaagaga
cagctacatctgggtcctttcgataaaatcttgctagtgtatgcaatggt
gtcagcgtttggatgctgattatggggtggatccctggatatggcagtct
ctacatggtccatcctttcgtctcagctccaaactttgtctctctaactc
cttccaagggtgttttgttcccacttctaaggaggggcatagtgtccaca
cttcagtcttcatttttcttgagtttcatgtgtttaggaaattgtatctt
atatcttgggtatcctaggttttgggctaatatccacttatcagtgagta
catattgtgtgagttcctttgtgaatgtgttacctcactcagatgatgcc
ctccaggtccatccatttggctagtaatttcataaattcattctttttaa
tagctgagtagtactccattgtgtagatataccacattttctgtatccat
tcctctgttgaggggtatctgggtctatccagc
gaattcaaaatatcacttttttgcagatgatatgatggtatatataagtg
aacctaaacattccaccacagaactcctaaacttgaaaaacaacgttggt
taaatagctggatataaaattaaccactcatgtcaatggcctttctcttc
acaaagaataaacaggctgagaatgaaataagagaagcattacccttctc
aatagtcacaaataatataaaatactttgttgtgactctaactaaggaag
gaaaagatctctatgataagaacttcaagtctctaaagaaagaaattaaa
gaatatctcagaagatggaaagatcgtccattattatggattggcagtat
caacattgtaaaaatggccatcttgccaaaagaaatctacagattcaata
aaatcaccattaaaattccaactcaattcttcagtgaattagaaagggca
atctgcaaatacattgggaataaacaaaacctaggatagcaaaaactctt
ctcctggataaaagaacctctggtgcaatcaccatgcctgacccaaagct
gtactacagagcaattgtgataaaaactgcatggtactgatatagtgaca
gacaagtagaccaatgaaatagaactgaagacccagaaatgaaccaacac
acctattgtcaattcatcatctacaagggagctaaaaccatccagttgaa
aaaaagactgcattttcaacaaatggtgctggcacaattggtggttatca
tgtagaagaatatgaatcaatccattcttatatccttgtactaaggtcaa
atgtaagtggatcaaggagctccacataaaatcagagacactgaaacttg
tagaggagaaaatgtggaaagcctcaaagatatgggaacagggaaaaatt
cctgaatagaagacaatggcttgtatgcagatttagattgacaaattgga
ctcataagctgcacatttttgtaggcaaaagacaccttcataagacaaag
gccaccaacgaatggtgaaagatcttcactatctaatcatagggataatt
caatatatgagatcgaagtgactcgaatcaatactcataaaacggctcga
gctagagattctcaccgagatgcatgctaaggcctggacaggtcccatct
atcgctgaattatccaacctgaatccctccacgcttgagtgctgattaat
ccatgagcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120579_1121036
seq2: B6Ng01-068A13.b_90_543

seq1  TTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATT  50
      |||||  ||||| |||||| ||||||||||||||||| ||||||||||||
seq2  TTTTT--TTTTTCTTTCCA-TTTTTATTAGGTATTTAGCTCATTTACATT  47

seq1  TCCAATGCTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTG  100
      |||||||||||||||||||||||||||| ||||||||||||||| |||| 
seq2  TCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTTCCCTA  97

seq1  CCCACCCACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATA  150
      |||  | ||||||||||||||| ||||| ||||||||||  || ||||||
seq2  CCCGACAACTCCCCCTTTTTGGACCTGGCATTCCCCTGTTTTGTGGCATA  147

seq1  TAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGG  200
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGG  197

seq1  CCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGT  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGT  247

seq1  TAGCTCATAACGTTGTTCCACCTATAGGGTTGGAGATCCCTTTAGCTCCT  300
      ||| |||||| |||| |||||||| ||||||| |||||||||||||||||
seq2  TAGTTCATAATGTTGATCCACCTAAAGGGTTGCAGATCCCTTTAGCTCCT  297

seq1  TGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCCATCCATTA  350
      ||| ||||||||||||||||||||||||||| | | ||||||||||||||
seq2  TGGGTACTTTCTCTAGCTCCTCCATTGGGAG-CATGTGATCCATCCATTA  346

seq1  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGCATAGTCTC  400
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAGTCTC  396

seq1  ACAAGAGACAGCTACATCTGCCTCCTTTCAATAAAATCTTGCTAGTGTAT  450
      ||||||||||||||||||||  ||||||| ||||||||||||||||||||
seq2  ACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTAT  446

seq1  GCAATGGT  458
      ||||||||
seq2  GCAATGGT  454