BAC Information

Click to search

BAC

Clone NameB6Ng01-070H07
ChromosomeY (Build37)
Map Location 573,321 - 573,635
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070H07.bB6Ng01-070H07.g
ACCDH888457DH888458
length1,245915
definitionDH888457|Mus musculus domesticus DNA, BAC clone: B6Ng01-070H07, 5' end.DH888458|Mus musculus domesticus DNA, BAC clone: B6Ng01-070H07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactgttatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcatgtagaagaatgcgaatcgatccatacttatc
tccttgtactaagtcaaatctaagtggatcaaggaacttcacataaaaca
gagacactgaaactatagagagaaagtgggaaaagctgaagatatgggca
cagggaaaatcctgaacagaaacagcatgctgtgctgtaagatcgagaat
ggacaatgggactatgaactccaaagttctgcaggcagaacggtcttaga
caaaagaactcatcagaactaaagacttttaccaatctcgattcg
gaattccagagtccttttgctttgcattttcctgatgactaaagacactg
aacatatctttatgcgtttctcagccattagagataactctgttgagaat
tctctgtttagctctgtaccctattttttaaattttttttaattaggtat
tttcttcatttacatttccagtgctatcccaaaagtcccccataccctac
cccccccactcttctacccacccactcccacttcttggccctggtgttcc
cctgtactgaggcatataaagtttgtacgacaaatgggcctctctttcca
ctgatggccgactaggccatcttctgatacatatgcagctagagacacga
gctccaggggtactgattagttcatattgttgttccacctataaggttgc
agatccctttagctccttgggtactttctctaactcctccattgggggcc
ctgtgttccatccaatagctgactgtgagcaaccacttctgtgtttgcta
ggccacgacatagtctcacaagagacagctatatcagggtcctttcagaa
aaatcttgctagtgtatgcaatggtgtcagcgtttggaggctgattatgg
gatggatccccggatatggcagtctctagatggtgtaccctatttttatt
ttatttatttatttttttcactttttattattattattttttttctttcc
atttttattaggtatttagctcatttacatttccaatgctataccaaaag
tcccccatacccacccacccccactcccctacccgcccactccccctttt
tggccctggcattcccctgtactggggcatacaaagtttgcgtgtccaat
gggcctctctttccagtgatggccgactaggccatcttttgatacatatg
cagctagagacaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573635
seq2: B6Ng01-070H07.g_190_506 (reverse)

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      ||||||||| |||||||||||||||||||||||||||||||||||| | |
seq2  ATGGAGGAGTTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCTT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| ||||||||||||||||| ||| ||||| ||   |||||| |||||
seq2  ATAGGTGGAACAACAATATGAACTAATCAGTACCCCTGGAGCTCGTGTCT  100

seq1  CTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA  149
      |||||||||||||||||||||||||||||||| |||||||| ||| ||||
seq2  CTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCAGTGGAAAGA  150

seq1  GAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACC  199
      ||||||| || ||| | ||||||||||||||| |||||||||||||||||
seq2  GAGGCCCATTTGTCGTACAAACTTTATATGCCTCAGTACAGGGGAACACC  200

seq1  AGGGCCAAGAAGTGGGAGAAGGTGGGTAGGGTAGCAAGGCAGGGGGAGGA  249
      ||||||||||||||||||  ||||||||  | ||   ||  |||| ||| 
seq2  AGGGCCAAGAAGTGGGAGTGGGTGGGTA--GAAGAGTGGGGGGGGTAGGG  248

seq1  TATAGGGGACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATAACT  299
      ||| ||||||||||||||||||| | ||||||||||||||||||||| ||
seq2  TATGGGGGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCT  298

seq1  AAT---AAAAAATTTAAAA  315
      |||   |||||||||||||
seq2  AATTAAAAAAAATTTAAAA  317