BAC Information

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BAC

Clone NameB6Ng01-070K20
ChromosomeY (Build37)
Map Location 573,377 - 573,550
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070K20.bB6Ng01-070K20.g
ACCDH888608DH888609
length1,226192
definitionDH888608|Mus musculus domesticus DNA, BAC clone: B6Ng01-070K20, 5' end.DH888609|Mus musculus domesticus DNA, BAC clone: B6Ng01-070K20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgagaaggttatctattcagtaacattcaaatttacttctag
tagagacagtgaaactaattaggcattacaaagaatggagctagaatagc
tcagagctagtctgcagagtgatttcttaggacagtagccagtcttaccc
aaacaagggaatacacaatggcctagctaataggtgggtttaccatgtaa
gagttagggaatcccactgagacaggaatcttcactacagccaggtatag
caggttatattgtatattagaagcaagttggtgaattcttctgacaaatg
gagattctccacagatacttaaaagaacagccaagttgcacttatacaag
aatttatcaaggcctaggaaatgggggtggtggtattgcattattcatga
gaaggtctgctagagcagaaccccctggtgctagctttcacaaggctcaa
aggagtagcacaaattgtgactaggatgtgaaatccttacctgtcattag
cctaccctacgcagggctgttttatctttactgtaaatattacctggttc
ctgtagtccttttgaagtcattcctttgttttgtttcaggtaacttcaat
gtactttgcctgctgtgacatcctaccccctttattttctgcattatata
agactggtgttctctttgtgacaatacattcagattctacacaatctcct
gtgttgcatctgtctgtcattcattcgccgactccttgtccacctgtaac
cagagacccattctatgcagacaagagaccaagagggtctgcaacaattc
ccgagtgtatggattgagtaggtctctacttctaccttctcttggggggc
tctttttcttctgttgatttgcttttgtccaacttcaatgtgatagtttt
gttttaacgtcctattagattttatttgtttgctgtttgtgtatctctta
ggaacctgttcttttctaagagtgacagaaggggagtggaccagatagaa
gaagaggtggggagaactgagtggagtacaggaaggtaaacttgtataag
gtattattgttataatagaagttaacttttagtaaaagaaggaacaccaa
taaataaatctttttaaataaaaaatatagttccattgaggaatctccta
catgattgaaatgaccgaataccttagaatacctcattgggaatctcatc
gctgcacttactctctatcctcttca
agttgctccctattggaggaacaacaatatgaactaaccagtatccccag
agctcgtgtctctagctgcatatgtagcagaagatggcctaatcggccat
cactggaaagagaggcccattggacttgtaaactttatgtgccccagtac
aggggaatgccagggccaagaagtgggagtgggtgggtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573377_573550
seq2: B6Ng01-070K20.g_90_264

seq1  GGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCTCTAGCT  49
      |||||||||||||||| |||||||||||| |||||||| |||||||||||
seq2  GGAACAACAATATGAACTAACCAGTATCCCCAGAGCTCGTGTCTCTAGCT  50

seq1  GCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGAGAGGCC  99
      ||||||||| |||||||||||||| | |||||||| ||| ||||||||||
seq2  GCATATGTAGCAGAAGATGGCCTAATCGGCCATCACTGGAAAGAGAGGCC  100

seq1  CCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCC  149
      | |||| |||| ||||||||| ||||||||||||||||||  ||||||||
seq2  CATTGGACTTGTAAACTTTATGTGCCCCAGTACAGGGGAATGCCAGGGCC  150

seq1  AAGAAGTGGGAGAAGGTGGGTAGGG  174
      ||||||||||||  |||||||||||
seq2  AAGAAGTGGGAGTGGGTGGGTAGGG  175