BAC Information

Click to search

BAC

Clone NameB6Ng01-074B15
ChromosomeY (Build37)
Map Location 1,870,431 - 1,870,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B15.bB6Ng01-074B15.g
ACCDH891042DH891043
length1,223472
definitionDH891042|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B15, 5' end.DH891043|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctctcactctttgtttgttaagagcatctgcaacagctgttga
caatcatcccaagtaggctgatgagagaacataaggaactccaccaaccc
tgtgaggcactggggatcctgagaaagggggtggttagttttccagttat
aaagatcagcagaggaaaatgaccagtactgaagggtttgaagtttgggc
gggtccagagtccgcccagactctgtgctctgtggctccatgtacccaca
gctgtccacctctcgacagctggcggggtttggggttccctctgcggctg
gggttgaggctgtggataaggggaaggtagtggactaggccactcaggag
gctttatagattttagaggagctgatttagctggtggctgcgatttggga
gaagccttcaatttctcttgtaacatgagagtacaaccacaattttgaga
agcaaacccaattttaacagtgtaaacaacctttttttttttaaatgaac
tccaaaaacagtacttgctacaaagtttggttgcctgttcctgcacacaa
acacaagaaggtgtagccgccaatatctcaaaaaaacactaccctaaatc
ttatctgctataaatcgggtttctaggataagaattacatagaaaattac
ccaatttaggcgtatctttaaagacctgtttccatgggttgtctcatgct
gcatgttgtagttctaaattactctaacccagagttaccagttttaagcc
aactttttgttactaatgttccaaatttttaatcataaccaataacttat
gagccactaatctataaccaagacatataaaacatatttatacttttgaa
actatttagaaacaaaaatgaattggttgtatacattttcccatttaaac
caaacaaaattgttaatttttctagcagtaatttcaagagaggagcaact
tgtcacctgatgaatccaataatcccaagcacagagattttttgtaagga
aaaacagccattctgttcccttaccagagaatttgagaagctggtgttcc
ttataagaggcaggttttatatcagttcctcgcagcttctcagccacaag
gtgcaaggctcaagacaattgaaactgtttaatttattattattattttt
ttttacaattatcgatgcgaagaatggcctttctaagccagtccctacgt
tcatggtgaaacaattctctagg
tttgttcagttctgagccccattttttaatggggtgatttgattttctga
agtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cctattgacggtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagagcaagccattgctgttctgttc
aggaatctttcccctgtacccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggttttatgtgactctagctgcatatgc
atcaaaagatggcctagtcggccatcactggaaagagaggcccattggac
acgcaaactttatatgccccagtacaggggaacgccagggccataaaagg
ggagtgggtgggtaggggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870431_1870571
seq2: B6Ng01-074B15.g_404_544

seq1  TGACTCTTGCTGCATAGGTATCAAAAGATGGCCTAGTCGGCCATCACTGG  50
      ||||||| |||||||| | |||||||||||||||||||||||||||||||
seq2  TGACTCTAGCTGCATATGCATCAAAAGATGGCCTAGTCGGCCATCACTGG  50

seq1  AAAGAGAGGCCCATTGGACATGCAAACTTTATATGCCCCAGTACAGGGGA  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGA  100

seq1  ACGCCAGGGCCAAAAAGGGGCAGTGGGTGGGTAGGGGAGTG  141
      |||||||||||| ||| ||| |||||||||||||||||| |
seq2  ACGCCAGGGCCATAAAAGGGGAGTGGGTGGGTAGGGGAGAG  141