BAC Information

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BAC

Clone NameB6Ng01-074F16
ChromosomeY (Build37)9 (Build37)
Map Location 573,321 - 573,35260,430,723 - 60,431,536
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F16.bB6Ng01-074F16.g
ACCDH891227DH891228
length495814
definitionDH891227|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F16, 5' end.DH891228|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,352)(60,430,723 - 60,431,536)
sequence
gaattcattaaattcttaggcaaatggatgcatctggaggatatcatcct
gagtgaggtaactcaatcacaaaagaacacacatggaatgcactcactga
taagtgcatattagcccaaaaatttagactacccaagacacaatttgtaa
aacacattaaactcaagaagaaggaagaccaatgtgtggatactttgttc
cttcttagaatggggaacaaagtacccatggaggagttacagagacaaat
ctggatctaagacgaaaggatggaccatccagagacttccccatccagat
ccatcccaaatacaaccaccaaacccagacacaattgcatatgccagaaa
gattttgctgacaggaccctgacataactctctcttgtgtgtctatgcca
atgcctgtcaaatacagtagtggatgttcacagtcatctattggatggaa
cacagggcccctaatgaaggagctagagaaagtacccaaggagct
gaattccgtttcattgtctcgtaaagaaacgaatctgctccctaaggagt
ggacttactctctgggactcatttactctctagagctttcagtgcacttt
ggaaaggattcgaggtagtttgcaagaaagggcacataccaagaaccagg
aagacattaaatataagcagaaggtcgggatcaaagataacaaatattcc
atcaatactgcttgaccacagtggttgtgatcaagtttccaacttggctc
agaatttcttggcaacagtacccacccctccatctcaagctgacccagaa
aagcaggctaggaaaactaacctttgttctttaaggtttaaaattaatat
tttcctgagcacccttccctctgtttcatcttatatttgttttgctgact
agccaggcccctctctctcctccttttcatcctgatgtttcctcttcttc
cccgactccaaccccagagtatcttactgaacagtctgagagacgggaga
actacagccggagtttactcacagaagagctgacaggaaagtgtggggta
acagtaaggaaaggggaggcctgggaagatggcttagtctgacgtgcttc
ccatgtgagcatgagggcctgaactccatcttttagcatccaggtgaagc
agccaggggtgaaggaactgtgcctgaaatctgtaattgcatctgtaacg
ccatcgctggggaggtggagatgggaggacccctgtggctcattggccag
ccagttaaccaaattcagtgagagaccatgtctcaaaagatacgggaggg
gatgatgttaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573352
seq2: B6Ng01-074F16.b_509_540

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCT  32
      ||| ||||||||||||||||||||||||||||
seq2  ATGAAGGAGCTAGAGAAAGTACCCAAGGAGCT  32

seq1: chr9_60430723_60431536
seq2: B6Ng01-074F16.g_73_886

seq1  GAATTCCGTTTCATTGTCTCGTAAAGAAACGAATCTGCTCCCTAAGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTTTCATTGTCTCGTAAAGAAACGAATCTGCTCCCTAAGGAGT  50

seq1  GGACTTACTCTCTGGGACTCATTTACTCTCTAGAGCTTTCAGTGCACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTACTCTCTGGGACTCATTTACTCTCTAGAGCTTTCAGTGCACTTT  100

seq1  GGAAAGGATTCGAGGTAGTTTGCAAGAAAGGGCACATACCAAGAACCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATTCGAGGTAGTTTGCAAGAAAGGGCACATACCAAGAACCAGG  150

seq1  AAGACATTAAATATAAGCAGAAGGTCGGGATCAAAGATAACAAATATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAAATATAAGCAGAAGGTCGGGATCAAAGATAACAAATATTCC  200

seq1  ATCAATACTGCTTGACCACAGTGGTTGTGATCAAGTTTCCAACTTGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATACTGCTTGACCACAGTGGTTGTGATCAAGTTTCCAACTTGGCTC  250

seq1  AGAATTTCTTGGCAACAGTACCCACCCCTCCATCTCAAGCTGACCCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTTGGCAACAGTACCCACCCCTCCATCTCAAGCTGACCCAGAA  300

seq1  AAGCAGGCTAGGAAAACTAACCTTTGTTCTTTAAGGTTTAAAATTAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCTAGGAAAACTAACCTTTGTTCTTTAAGGTTTAAAATTAATAT  350

seq1  TTTCCTGAGCACCCTTCCCTCTGTTTCATCTTATATTTGTTTTGCTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAGCACCCTTCCCTCTGTTTCATCTTATATTTGTTTTGCTGACT  400

seq1  AGCCAGGCCCCTCTCTCTCCTCCTTTTCATCCTGATGTTTCCTCTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCCCCTCTCTCTCCTCCTTTTCATCCTGATGTTTCCTCTTCTTC  450

seq1  CCCGACTCCAACCCCAGAGTATCTTACTGAACAGTCTGAGAGACGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACTCCAACCCCAGAGTATCTTACTGAACAGTCTGAGAGACGGGAGA  500

seq1  ACTACAGCCGGAGTTTACTCACAGAAGAGCTGACAGGAAAGTGTGGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCCGGAGTTTACTCACAGAAGAGCTGACAGGAAAGTGTGGGGTA  550

seq1  ACAGTAAGGAAAGGGGAGGCCTGGGAAGATGGCTTAGTCTGACGTGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGGAAAGGGGAGGCCTGGGAAGATGGCTTAGTCTGACGTGCTTC  600

seq1  CCATGTGAGCATGAGGGCCTGAACTCCATC-TTTAGCATCCAGGTGAAGC  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCATGTGAGCATGAGGGCCTGAACTCCATCTTTTAGCATCCAGGTGAAGC  650

seq1  AGCCAGGGGTGAAGGAACTGTGCCTGAAATCTGTAATTGCATCTGTAACG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGGTGAAGGAACTGTGCCTGAAATCTGTAATTGCATCTGTAACG  700

seq1  CCATCGCTGGGGAGGTGGAGATGGGAGGACCCCTGTGGCTCATTGGCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGCTGGGGAGGTGGAGATGGGAGGACCCCTGTGGCTCATTGGCCAG  750

seq1  CCAGTTCAACCAAATCCAGTGAGAGACCATGTCTCAAAAGATACGGGAGG  799
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  CCAGTT-AACCAAATTCAGTGAGAGACCATGTCTCAAAAGATACGGGAGG  799

seq1  GAGTGATGTTAACCT  814
      |  ||||||||||||
seq2  GGATGATGTTAACCT  814