BAC Information

Click to search

BAC

Clone NameB6Ng01-075C13
ChromosomeY (Build37)
Map Location 2,652,627 - 2,652,692
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244
Downstream geneLOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075C13.bB6Ng01-075C13.g
ACCDH891794DH891795
length1,0321,229
definitionDH891794|Mus musculus domesticus DNA, BAC clone: B6Ng01-075C13, 5' end.DH891795|Mus musculus domesticus DNA, BAC clone: B6Ng01-075C13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtttttaatagctgagtagtactccattatgtaaatgtacc
acattttctgtatccattcttctgttgaggaacatctgggttctttccag
tttctggatattataaatatggtttctatgaacatagtggagcatgtgtc
cttattatctgttggagcatcttctgcctaaatgcccaggagtggtattg
ctgggtactcaggtagtactatgtccaattttctcaagaaccatcagact
ggtttacaaagtggttgtgccagcttgcaatccaaccagcaattgaggaa
tgttcctctttcttcatatccttgccagcatctgctgtcacctgggtttt
tgatcatagcctgttgggagccgcgcccacattcgccgttacaagatggc
gctgacagctgtgttctaagtggtaaacaaataatctgcgcatgtgccga
gggtggttctccactccatgtgctctgccttccccgtgacgtcaactcgg
ctgatgggctgcagccaatcagggagtgacacgtcctaggcgaaggataa
ttctccttaatagggacggggtttcgttttctcgctctcttgcttcttac
actcttgctcctgaagatgtaagcaataaagttttgccgcagaagattct
ggtttgctgtgttcttcctggccgggcgtgagaacgcgttaataagaatt
ggtgccgaaacccgggacgagaaaatccgggacgagaaaaaatccgggac
gaaaaaatacaagaaaactcgggaccggcacaaggaagatccctcattcc
agaaccagaactgcgggtcacggttatgaagtgttcccacaacacagact
gttgagaaggattcaactgcatgaattcagaacttttcagctggggaacg
agagtaccagtgagtacagctttacgaggtacacctgggccttgaacttt
ctaaggaaatcaagacagtctatcagagtaaagtgaaaatgtttggcctt
gaattttttctatgtagagcccttttgttctt
gaattcaagtgacaaagaacagtttatagacatatttttatatatttgaa
tattgtatatatgtatacatatatatgtgtgtgtgtatatataatatata
tattatatacttatgaatcatgatgtacttgagaaatctgtaaaagaatt
ataggaatatcttttaaatacacatgacatgacacagcatgctgtcatag
agatattttaaaatcataagcaaatgttctagaaaacaaatcagcaccaa
ctggctaggacagaattttaaaatttatcattgagaatatcacaatagct
atgtttcctttcctgaagagttattctatgcaagaaataattaaaattta
tagggttgttcgaatatcttatgctacgtccactccagtgcagtctgctt
ggtagacctaaagcctaaaagcaatcatgaagcagagtttcaaggaaact
ttgcctcctggaaccttggcattcccatagcccatatagacaaaccctgt
ccctgcatcagtctggtgtatggatccatgtgctctctttcagtattgtt
ttattataagtgcctttaaggattgatttttgacatagctaatcttccac
cagtgttccaatggttcctagaaaatccttgaagcttatggtgagcttgg
atttcagtaagaatgttatctattcagtaacattcaaattcacttctagt
agagacagtgaaaataatcaggcattacaaagtacagagctaggaaagct
cagggctagtatgcatagtaattgcttaggacagtagccttttcacaccc
aaacacaggaatacacaatgacctagcaaagaggtggggttgtcacatga
aggggttagtggaagggaattcccctggtacaagtttcttcactaggccc
agaggaatagcataatcagtatttactaaagaacccctggtggtgggttt
aacaatagactagcattgcatcagagcaattcacttggctccattttaag
tagtaaacaatgccctggtccccgtcatctttttatgtatgcattccctt
ttttgtgttcatgtactgcggatgtgggttgcgaacctttctatttatct
gtataaaaagtcggaatgctcgtttgccatcaatcggatctagccactcc
cttgttttcacccctcctctgaccttggcactgtcaacgaaaccctaatc
cctccctcacgtaggtagatagtacggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_2652627_2652692
seq2: B6Ng01-075C13.b_431_495

seq1  TCGCCATTACAAGATGGCGCTGATATCCGGTGTTCTAACTGGTAAACAAA  50
      ||||| ||||||||||||||||| |  | ||||||||| |||||||||||
seq2  TCGCCGTTACAAGATGGCGCTGACA-GCTGTGTTCTAAGTGGTAAACAAA  49

seq1  TAGTCTGCGCATGTGC  66
      || |||||||||||||
seq2  TAATCTGCGCATGTGC  65