BAC Information

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BAC

Clone NameB6Ng01-078P11
ChromosomeY (Build37)5 (Build37)
Map Location 573,321 - 573,36645,255,196 - 45,255,554
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078P11.bB6Ng01-078P11.g
ACCDH894519DH894520
length500359
definitionDH894519|Mus musculus domesticus DNA, BAC clone: B6Ng01-078P11, 5' end.DH894520|Mus musculus domesticus DNA, BAC clone: B6Ng01-078P11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,366)(45,255,196 - 45,255,554)
sequence
gaattcctaggcaaattgatggacctggtgggcatcatcctgagtgaggt
aacccaatcataaaagaactcacatgtactcactggtaagtggatattag
ccccaaaacttagaatatccaagatacaatttgcaaaatatgtgaaactc
aagaagaacaaagaccgaagtgtggacactttgccccttcttagaattgg
gaacaaaacacccatggaaggagttacagagacaaagtttggagctgaga
cgaaaggatggaccatctagagactgccataccatgggatccatcccata
atcagcctccaaacactgacaccattgcatacaccagcaagattttgctg
aaaggatcttgatatagctgtctcttgtgaggctatgccggggcctagca
aacacagaagtggatgttcacagtcagctattagatggaacacaggaccc
cccaatggaggagctagagaaagtatccaaggagctaaagggatctgcaa

aaaccccttccagcacacagagatgttgatctcagactgctaacatattt
caaactcccctgaagttctctggtgtctgaatcccgcaggcagattattc
taattgcctctctcctactctctggatggctgggtcacctccacccactg
cttctcctcctgcttgcagcaagctctggccttttaaaattgctgcttct
aatgtgctaccaaaatagggaatcagaaaactaagcttgtaacaatagct
tctgaaagaagagctaagcttcctaagtggttttcttgtgtgtagctctt
ggggacatgtgcatttatttatttgtgtgtatgtgtgtgtgtgtgtgtgt
gtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573366
seq2: B6Ng01-078P11.b_501_546

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAA  46
      ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGATCTGCAA  46

seq1: chr5_45255196_45255554
seq2: B6Ng01-078P11.g_74_432

seq1  AAACCCCTTCCAGCACACAGAGATGTTGATCTCAGACTGCTAACATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCTTCCAGCACACAGAGATGTTGATCTCAGACTGCTAACATATTT  50

seq1  CAAACTCCCCTGAAGTTCTCTGGTGTCTGAATCCCGCAGGCAGATTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCCCCTGAAGTTCTCTGGTGTCTGAATCCCGCAGGCAGATTATTC  100

seq1  TAATTGCCTCTCTCCTACTCTCTGGATGGCTGGGTCACCTCCACCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCCTCTCTCCTACTCTCTGGATGGCTGGGTCACCTCCACCCACTG  150

seq1  CTTCTCCTCCTGCTTGCAGCAAGCTCTGGCCTTTTAAAATTGCTGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTCCTGCTTGCAGCAAGCTCTGGCCTTTTAAAATTGCTGCTTCT  200

seq1  AATGTGCTACCAAAATAGGGAATCAGAAAACTAAGCTTGTAACAATAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTACCAAAATAGGGAATCAGAAAACTAAGCTTGTAACAATAGCT  250

seq1  TCTGAAAGAAGAGCTAAGCTTCCTAAGTGGTTTTCTTGTGTGTAGCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAGAAGAGCTAAGCTTCCTAAGTGGTTTTCTTGTGTGTAGCTCTT  300

seq1  GGGGACATGTGCATTTATTTATTTGTGTGTATGTGTGTGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACATGTGCATTTATTTATTTGTGTGTATGTGTGTGTGTGTGTGTGT  350

seq1  GTGTGTGTG  359
      |||||||||
seq2  GTGTGTGTG  359