BAC Information

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BAC

Clone NameB6Ng01-079D01
ChromosomeY (Build37)
Map Location 1,120,585 - 1,120,987
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079D01.bB6Ng01-079D01.g
ACCDH894675DH894676
length9611,092
definitionDH894675|Mus musculus domesticus DNA, BAC clone: B6Ng01-079D01, 5' end.DH894676|Mus musculus domesticus DNA, BAC clone: B6Ng01-079D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctgaataaacactattttttgcataatatttgagactggggt
atcattcttcagaacttcttggaccctaacaaaatgtgattaggagtcat
ttttttttccatttttattaggtatttagctcatttacatttccaatgct
ataccaaaagtcccccatacccacccacccccactcccctaaccacccac
tccccccttttggccctggcattcccctgtactggggcatataaagtttg
catgtccaatgggcctctctttccagtgatggccgactaggccatctttt
gatacatatgcagctagagtcaagagctccggggtactggttagttcata
atgttgttccacctatagggttgcagatccctttagctccttgggtactt
tctctagctcctccattgggagccctgtgatccatccattagctgactgt
gagcatccacttctgtgtttgctaggccccggcatagtctcacaagagac
agctacatctgggtcctttcggtaaaatcttgctagtgtatgcaatggtg
tcagcgtttggatgctgaatatggggtggatccctggatatggcagtctc
tacatggtccatcctttcatctcagctccaaactttgtctctgtaactcc
ttccatgggtgttttgttcccaattctaaggaggggcatagtgtctacac
ttcagtcttcattcttcttgagtttcatgtgtttagcaaattgtatctta
tatcttgggtatcctaggtttggggctaatatctacttatcagtgagtac
atattgtgtgagttcctttgtgaatgtgttacctcactcaggatgatgcc
ctccaggtccatccatttggctaggaatttcataaattcattctttttat
agctgagtagtactccattgtgtagatgtaccacatttctgtatccattc
ctgtgttgagg
gaattcctgatctcaccaattcttttaacatgatccttttcagcatctaa
ggagatgatcatgtgattttttttctttgagtttgtttatatagtggatt
aggttattggattttcatatagagaaccaaccttgcatccctgggatgca
gcctacttgatcatgatgaatggtgattttgatgtgttcttggattcatt
ttgaaagaattttcttgagtatttttgcattgatattcataaacgagatt
ggtctgaatttttcccttttggttgggtctttgtgttatttatgtatgag
agtaattgtggcttcatagaacaagttaggtagtattccttctgtttcat
tttatgaaataatttgtggaatattggtattagatcttcttttaaggtct
tgtagaattctgcactaaatccttctagctctgggcttatttttggttgg
gaggtttttaaatgacttatatttctttatggaatgtggtactgtttaga
tagtttacttgatcttgatttaactttggtatgtggtatctgtctagaaa
atgatttcatctagattttccagttttattgagtataggcttttgaaata
ggatatgatgattttttttttttagtttcctcagtttctgttgttatgtc
tcccttttcaattctgattttattaatttggatattgtctctgggccctt
tagttagtttgactaggggtttatctatcttgttaatattctcaaagaac
cagcttttggttttgttgatactttgtagagttctctttgtttctatttg
gttgatttcaggcctgagtttgactatttcttgccatctagtgctcttgg
gtatattttgtttccatttcttccagagctctcagtgttctgttaagtta
ctagtataggatatctccaaatttttttaccagggtacttagtgctatga
gttttctcttagcagtgcttcattctgtctatagtttgggtttgctggta
ctcattttcatgaaattctaaaagtcttatttctttattctcttgacagg
tatcattgagtagagagttctttccaggataatgagaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120585_1120987
seq2: B6Ng01-079D01.b_142_543

seq1  ATTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAAT  50
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  ATTTTTTTTTCCA-TTTTTATTAGGTATTTAGCTCATTTACATTTCCAAT  49

seq1  GCTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACC  100
      |||||||||||||||||||||| ||||||||||||||||||||  |||||
seq2  GCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTAACCACC  99

seq1  CACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGT  150
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  CACTCCCCCCTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGT  149

seq1  TTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT  199

seq1  TTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTC  250
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTC  249

seq1  ATAACGTTGTTCCACCTATAGGGTTGGAGATCCCTTTAGCTCCTTGGCTA  300
      |||| ||||||||||||||||||||| |||||||||||||||||||| ||
seq2  ATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTA  299

seq1  CTTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCCATCCATTAGCTGAC  350
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGAC  349

seq1  TGTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGCATAGTCTCACAAGA  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGA  399

seq1  GAC  403
      |||
seq2  GAC  402