BAC Information

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BAC

Clone NameB6Ng01-084A14
ChromosomeY (Build37)
Map Location 1,544,821 - 1,544,932
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084A14.bB6Ng01-084A14.g
ACCDH898118DH898119
length5241,247
definitionDH898118|Mus musculus domesticus DNA, BAC clone: B6Ng01-084A14, 5' end.DH898119|Mus musculus domesticus DNA, BAC clone: B6Ng01-084A14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaacagctgttgttacctatacaagacccatacagaatcaagc
cagtaaatttttttagtacagatgagaaaagaatttccaaggtcatactt
ctagctgaagaactgttgacaaatggtggttgctgaaggagaggaaggaa
tagcttttcttcagtgatatggtccatggaaggaggtcattgcttccata
gatgtcagtaaacacatgcacatagaagcagcattagttggactcagtag
ttcatttcaatttaaaaaaggtaggtagttaaagaggaacttgttggagg
ttagctgggcagagatgaaagtgaggtgtgggagggagaaagagagagag
agagagagagagagagagagagagagagagagagagagacagagagagac
agagacagagacagagacatagagacagagagagacagagagagagacag
agagagagacagagagagagagagggggagaaggagagagagagtgagag
agggagatagagagagagatattt
gaattcaaagatgatcttagaagatggaaaagtctcccatgctcatggat
tggcagaattaatatagtcaacatggctctattgccaaaaacaatctaca
gattgagtgcaatccccatcaaaattctaactcaattcttcacagagtga
aggcaaccaacagactgggaaaagatctttaccatcctaaattcgatagg
gggctaacatccaatatatataaagaattcaggaaggtggactccagaaa
aacaaacaatcctattttaaaaattggagtacagagctaaacaaagaatt
ctcaactgaagaatcttgaatggacttgaagcacttaaagaaatgttcag
catccttggtcatcagggaaatgcaaatcaaaatgacccagagatttcac
ctcacaccagtaagaatggctaagataaaaaaaaactcaggtgacagcag
atgctggtgaggatatggagaaggacaaacatgcctccattgctggtggg
attgcatgctggtgcaaccactctggaaatcagtttggtggttcctcaga
aaattggacttagttcccccgggagatccaccaatgccactcctcatcat
atacccagaagatgctcaaacatgtaataaggacacatgctccactatgt
tcatagcagccttaattataatagccagaagctgggaagaacccagatgt
ccctcaacagaggaatggatgcagaaaatgtacatttacacaatggagta
ctatgcagctattaaaaaaacaatgaatttatgaaattcttagacaaatg
gatggatatggaggatcatcctaagtgaggtaacccaatcacaaaagaat
ggacatgatatgcactgaatgataagtgaattgataagtgagcccagaag
ctccagatcctttttagaaggggaacaaaatacccatggaaggagttaca
gagacaaagttcggagcagagactgaaggagcaaccatcccgaaactgcc
ccacctggggaatccatcccataaccaccaccaaaccacactatggcaga
tgccaacaaagcttgctgcaggagcctgatatgctgcttcctgaaggcct
ctgccagtgccttgccaaatcagaagttgatggccctgtccactccaatg
gttgaactaaggccccattggaggactagagagaatccaggactggaggt
tgaacctcactctggaactctcataataactgacctgtaatcctccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544821_1544932
seq2: B6Ng01-084A14.b_378_501

seq1  GAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GAGAGAGAGAGAGAAAGAGAGAG------------AGAGAAAGAGAGAGA  88
      |||| ||||||||| ||||| ||            ||||| |||||||||
seq2  GAGACAGAGAGAGACAGAGACAGAGACAGAGACATAGAGACAGAGAGAGA  100

seq1  AAGAGAAAGAGAGAGAGAGAGAGA  112
       ||||| ||||| |||||||||||
seq2  CAGAGAGAGAGACAGAGAGAGAGA  124