BAC Information

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BAC

Clone NameB6Ng01-089O12
ChromosomeY (Build37)
Map Location 1,544,823 - 1,544,886
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089O12.bB6Ng01-089O12.g
ACCDH902357DH902358
length1,271898
definitionDH902357|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O12, 5' end.DH902358|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttgccttttcagtgacattcagaattgccgctgg
tattacactatcactttgaataaaagctaagtcactgccctacacaggaa
tttaccatcatctaggaagaaggaagtttgagacctaaggaggaaccaga
gtagatacttagaactatagatagctgagttacacccatacacacatatt
tacaatggcctaggggtacggtggactatacaatagactaaaataagaac
tatggcaagggcacgaagcccttaaacctggcttctaagattaagtggat
cttaggtggagctctttttgatcccagttgttaacaatgaattctatccc
aggtggttcctgttagaccttctgtgtttgtattcctctgttttgtctaa
gaatccagtaacctctttgtaccttgctggtgtgtcacccaacttcccta
ttttcttctgtataaaaagtttgatgctcaatttgacaaattccattcag
attctacacgacctctcctgtgtgcatctgtctgtcattccatccaacgc
tttgcccacctgcgactagagacctgtttcacgcagacaaaggggcccag
agggtctgcggcaaatgtgtatgggttctaggtccagcttctgcatgatc
actggttagtagcccagactctgtgaacccctatagcactaggttacttg
agtgtgtgggtcttctggtgtctttgaccattctcacttctatccttgac
tcctcaaaaggatttcccaggctcctcctgatgtttggctgtatgtcttt
gcacctgcctccatttcctgtggggtgaaaactcccaaatgacagttata
ctaggttcctatcttcaagcatagcaaagtaaaagtatcagtggctggct
ttctcacttgggatgggtctaaagttgaggcaatcgtgggttggctgttt
catcagtctgtgcttcatctttgttcctacaaatcttgaagggaaaacaa
attttgggtcaaaattttgtgatgaattcttattttcaaaatttatttgt
tgtaaaagaatagtagaatataagagacaagcaattatctctttttattc
tcccggattcaagaaagaaacggagaaaaacaaaaaattcctgcatgaaa
accatgtaaaggttgataaaaccaggtgcctggcgtaatggtaataaaaa
tcagtaaatccaatgcttactcacactcggtaagcaagagatacgaagtc
ttatacacagtgtgaacgatg
gaattccaggaccaggaatgggactgggtatgttggcaagcagggtggat
agtggagggatatgggacttttggaggggaaacaaggaaattggataaca
tttgaaatgtaaatatagaaaatatctaataaaatagaaaataaaaaaaa
gcatgttaccctgttctgttacgttacagtggtttaataaaaagaatgta
agaaaaaaagaataaatgaaagagagagagagagagagagagagagagag
agagagagagagagagagaaaagaagagaagagaaaagaaaagaaaagaa
aagaaaagaaaagaaaaaagaagagaagagaaaaggaaatgcagtctttt
ttccacgggattgttttatctcctttgtcaaagattaagtgtctgtagtt
gtatggattcatttctgggtcttgtattctattccatttttgacctgcct
gtcattgtaccagtatcatgcagtttttatcactattgctatatgttact
gtttgaggtctgggatgctgattccccgagaagtacttttcttgttaaga
atagttttcgctgtcctggggtttttgttttccagaagaatttgagaatt
actcttcccttctttctttttcctttcctttcctttcctttcctttcctt
tccattcctttcctttcctttcctttcctttcctttctcatttttttctt
ttcttttccttttctttattgttcattttttttcgaggagaattgattga
aaatgtagattgctttcagcaagatggtcatttttactatattaatcctg
ccaaaccatgagcataggagatctttccatcttctgaggccttattcgat
ttcttacttcagagacttgaagttcttgtaatacagatctttcactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544823_1544886
seq2: B6Ng01-089O12.g_288_356

seq1  GAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GA----GAGAG-AGAGAAA  64
      ||     |||| |||||||
seq2  GAAAAGAAGAGAAGAGAAA  69