BAC Information

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BAC

Clone NameB6Ng01-092A24
ChromosomeY (Build37)13 (Build37)
Map Location 1,120,708 - 1,121,08191,848,993 - 91,849,755
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092A24.bB6Ng01-092A24.g
ACCDH903925DH903926
length944763
definitionDH903925|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A24, 5' end.DH903926|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,708 - 1,121,081)(91,848,993 - 91,849,755)
sequence
gaattcccctgtactggggcatataaagtttgcaagtccaatgggcctct
ctttccagtgatggccgactaggccatcttttgatatatatgcagctaga
gtcaagagctccggggtactggttagctcataatgttgttccacctatag
ggttgcagatccctttagctccttggctactttctctagctcctccattg
ggagccctatgatccatccattagctgactgtgagcatccacttctgtgt
ttgctgggccccggaatagtctcacaagagacagctacatctgcgtcctt
tcaataaaatcttgctagtgtatgcaatggtgtcagcgtttggatgctga
ttatggggtggatccctggctatggcagtctctacatggtccatcctttc
atctcagctccaaactccgtctctgtaactccttccatgggtgttttgtt
cccaaatctaaggaggggcatagtgtccacacttcagtcttcattctcct
tgagtttcatgtgtttagcaaattatatcttatatcttgggtatcctagg
tttggggctaatatccacttatcagtgaatacatattgtgtgagtttctt
tgtgaatgtgttacctcactcaggatgatgccctccaggtccatccattt
ggctaggaatttcataaattcattctttttaatagctgagtagtactcca
ttgtgtagatgtaccacattttctgtatccattcctctgttgaggggcat
ctaggttctttccagcttctggctattataaataaggctgctatgaacat
agtggagcatgtgtccttcttacctgttggggcatcttctggatatatgc
ccaggagaggtattgctggatcctccggtagtactatgtccagttttctg
aggaaccgccagactgattttccagagtggttgtacaagcctgc
gaattctcactcctgcatttgtttaaaggatgataattaacttacatatg
cagaatgtgcctaaagttcaaaatggtcattaactattgtctccagattt
ttattctccgtgattcgttaaaaagagtatattaagcttccttcagactt
aaatatgagacaaagatgtgggaaaacctactttgggagttgtttgtatg
agggattgattgaaaagcatacactgtgccatttgaaatgcaaacaatca
tgaaattcgtcttctgtttgaatgtctgaatgcccttgatcctttgatcc
acagcactgagcggttacagctgctatgtggtttcctttgccctccacaa
tccaggaggatgaaccagaagatgagggatattgctgcagaggaccaaga
ataccactgtggttgcaggactggctccactaatggtctttaaagaattg
tatttcttttgcccaacttgagtaacactttgtttcctgcagccaggatc
tacagcctgcctcccaaggacacattcttctcaagccacatttacagcca
gagaggctaaatgaatgtgggggaaggaaactccaaaaagggaccaaaac
ttgttttctttttactattagaacattacatatgaaagtcttgctgatga
gggaacaagttagttatccaataatgcatcatcttggttagctgaactct
gatgcagtagaattgaatattttgttctctctctctctctctctctctct
ctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120708_1121081
seq2: B6Ng01-092A24.b_32_405

seq1  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCT  50

seq1  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT  100

seq1  CAAGAGCTCCGGGGTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGG  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAAGAGCTCCGGGGTACTGGTTAGCTCATAATGTTGTTCCACCTATAGGG  150

seq1  TTGGAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGG  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGG  200

seq1  AGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT  250

seq1  GCTGGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGCCTCCTTTC  300
      |||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  GCTGGGCCCCGGAATAGTCTCACAAGAGACAGCTACATCTGCGTCCTTTC  300

seq1  AATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATT  350

seq1  ATGGGGTGGATCCCTGGCTATGGC  374
      ||||||||||||||||||||||||
seq2  ATGGGGTGGATCCCTGGCTATGGC  374

seq1: chr13_91848993_91849755
seq2: B6Ng01-092A24.g_54_816

seq1  GAATTCTCACTCCTGCATTTGTTTAAAGGATGATAATTAACTTACATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTCCTGCATTTGTTTAAAGGATGATAATTAACTTACATATG  50

seq1  CAGAATGTGCCTAAAGTTCAAAATGGTCATTAACTATTGTCTCCAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTGCCTAAAGTTCAAAATGGTCATTAACTATTGTCTCCAGATTT  100

seq1  TTATTCTCCGTGATTCGTTAAAAAGAGTATATTAAGCTTCCTTCAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCCGTGATTCGTTAAAAAGAGTATATTAAGCTTCCTTCAGACTT  150

seq1  AAATATGAGACAAAGATGTGGGAAAACCTACTTTGGGAGTTGTTTGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAGACAAAGATGTGGGAAAACCTACTTTGGGAGTTGTTTGTATG  200

seq1  AGGGATTGATTGAAAAGCATACACTGTGCCATTTGAAATGCAAACAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTGATTGAAAAGCATACACTGTGCCATTTGAAATGCAAACAATCA  250

seq1  TGAAATTCGTCTTCTGTTTGAATGTCTGAATGCCCTTGATCCTTTGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCGTCTTCTGTTTGAATGTCTGAATGCCCTTGATCCTTTGATCC  300

seq1  ACAGCACTGAGCGGTTACAGCTGCTATGTGGTTTCCTTTGCCCTCCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTGAGCGGTTACAGCTGCTATGTGGTTTCCTTTGCCCTCCACAA  350

seq1  TCCAGGAGGATGAACCAGAAGATGAGGGATATTGCTGCAGAGGACCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGGATGAACCAGAAGATGAGGGATATTGCTGCAGAGGACCAAGA  400

seq1  ATACCACTGTGGTTGCAGGACTGGCTCCACTAATGGTCTTTAAAGAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACTGTGGTTGCAGGACTGGCTCCACTAATGGTCTTTAAAGAATTG  450

seq1  TATTTCTTTTGCCCAACTTGAGTAACACTTTGTTTCCTGCAGCCAGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTTGCCCAACTTGAGTAACACTTTGTTTCCTGCAGCCAGGATC  500

seq1  TACAGCCTGCCTCCCAAGGACACATTCTTCTCAAGCCACATTTACAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCTGCCTCCCAAGGACACATTCTTCTCAAGCCACATTTACAGCCA  550

seq1  GAGAGGCTAAATGAATGTGGGGGAAGGAAACTCCAAAAAGGGACCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTAAATGAATGTGGGGGAAGGAAACTCCAAAAAGGGACCAAAAC  600

seq1  TTGTTTTCTTTTTACTATTAGAACATTACATATGAAAGTCTTGCTGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTTTTTACTATTAGAACATTACATATGAAAGTCTTGCTGATGA  650

seq1  GGGAACAAGTTAGTTATCCAATAATGCATCATCTTGGTTAGCTGAACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAAGTTAGTTATCCAATAATGCATCATCTTGGTTAGCTGAACTCT  700

seq1  GATGCAGTAGAATTGAATATTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTAGAATTGAATATTTTGTTCTCTCTCTCTCTCTCTCTCTCTCT  750

seq1  CTCTCTCTCTCTC  763
      |||||||||||||
seq2  CTCTCTCTCTCTC  763