BAC Information

Click to search

BAC

Clone NameB6Ng01-099M12
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,460
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099M12.bB6Ng01-099M12.g
ACCDH909480DH909481
length500745
definitionDH909480|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M12, 5' end.DH909481|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggatattagcccccaacctaggatacccatgatataagatat
aatttgctaaacacatgaaactcaaggagaatgaagactgaagtgtggac
actatgcccctccttagatttgggaacaaaacacccatggaaggagttac
agagacggagtttggagctgagatgaaaggatggaccatgtagagactgc
catagccagggatccaccccataatcagcatccaaacgctgacaccattg
catacactagcaagattttattgaaaggacgcagatgtagctgtctcttg
tgagactatgccggggcccagcaaacacagaagtggatgctcacagtcag
ctaatggatggatcatagggctcccaatggaggagctagagaaagtagcc
aaggagctaaagggatctgcaaccctataggtggaacaacattatgagct
aaccagtaccccggagctcttgactctagctgcatatatatcaaaagatg

gaattctttgttaagctctgtaccccatttttagtaaggatatttgtttc
tctggattctaatttttgaggttttttgcatatattgaatatttaaccat
ctatcagatgtaggcttggtaaagattttttcccaatctgttggttgcca
tttcatcctgttgaccgtgtcctttgccttacagaacgttgtaattttat
gagatcccatttgtcacttcttgatcttagagcataaggtactggtggtc
tgttcattaaatttttctcttgggaaaaaaagggggctctggggaagagg
ggcaaggaagacccatgccccgctagagttttacctattccctggtctgg
caggtgtgggagagctgccatacattttccactcagcccttggtggtcat
tcaagcctctgatccactcttgatggggttgccaaggggcagccctacct
ggaaaccccagagatactttgttaaagccaccagggttatacgagagagt
gatgagggaagagtttcccaatacctgttagattgagtgcagtggacctt
gactggagcacaggaaggccttataacaagattagaaatggctcattagg
agaaagcctgtcccatcctccaagtacagtgggctttgatgagcagagac
attctatggcttttgagctttattatagaaatgcagggggaaagagagaa
gagagagggggggctagagagaaagagagagtaagatggaaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870460
seq2: B6Ng01-099M12.b_436_550

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||| ||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAGCTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATG  115
      |  ||||||||||||
seq2  ATATATCAAAAGATG  115