BAC Information

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BAC

Clone NameB6Ng01-101E10
ChromosomeY (Build37)
Map Location 515,589 - 516,321
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101E10.bB6Ng01-101E10.g
ACCDH910515DH910516
length7331,151
definitionDH910515|Mus musculus domesticus DNA, BAC clone: B6Ng01-101E10, 5' end.DH910516|Mus musculus domesticus DNA, BAC clone: B6Ng01-101E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccatttgttccttccattttactataggatgtgagtcactgt
cttagcttgtgaatcactgtcttagctcagaggttcaactttagtcctca
cctgataaacaatttacctattggaccatttccttgagtttttgttttct
gttagaatgggcttgacttttagcttctaactatttgttgaaaaaaacag
aaatcatttatttttagcagacaattttgttttaatataggattaatact
cttaagattctataaacaaatttatggaaaatatgaacataaacaagctg
caaagtttgcatgaaaaattgtaaagacatttttaaaagaaaaaaagcat
atacatgttgggaacaaaatgaaaagggggggccctggggaagaactgaa
ggaaaaagatgcccacaccccaccagagtttccctattctacggtcagtc
aggcgtgggagggctgctacctaccctatccactcatccctgggtgggca
ttcctctatcccactcttcagggggtggtcaaggggcagccctgcctgcc
ccccctcctccagctacttggccaaagacaccagggttgtgggagagagg
gaagagggaagaagttcccaacactgaccagagtgcgcagcggaacttga
aggagcagagcagagattctatggtttaagagctttattatagaaatgca
ggggaaagagggaaggtagaaaggagggggggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaagaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgtcgtggatgttgagaaagaggaacactcctccattgttcgtg
ggattgcagggttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaaagatggaccatgtagagactgccatatccggggatccatcccataat
cagcttccaaatgctgacaccattgcatactagcaagattatgctgaaag
accctgatatagctgtctcttgtcagagtatgcctgggcctagcaaacat
agaagtggatgctcacagttggctatgggatggatcacatggcccccaat
gaggagctagagaagtacccaggagctaagggatctgcaaccctatagtg
gaacaacattatgactaccagtacctgagctctctgaccctagctgcatt
gtatcatgatgcctagtcgcatcctgaagaggccattgaaccgcaactta
tatgccagtcgggacgcagggcctaaaaagggagtgtggtggatagggat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_515589_516321
seq2: B6Ng01-101E10.b_49_781 (reverse)

seq1  CCCCCCCCTCCTTTCTACCTTCCCTCTTTCCCCTGCATTTCTATAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCTCCTTTCTACCTTCCCTCTTTCCCCTGCATTTCTATAATAAA  50

seq1  GCTCTTAAACCATAGAATCTCTGCTCTGCTCCTTCAAGTTCCGCTGCGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAAACCATAGAATCTCTGCTCTGCTCCTTCAAGTTCCGCTGCGCA  100

seq1  CTCTGGTCAGTGTTGGGAACTTCTTCCCTCTTCCCTCTCTCCCACAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCAGTGTTGGGAACTTCTTCCCTCTTCCCTCTCTCCCACAACCC  150

seq1  TGGTGTCTTTGGCCAAGTAGCTGGAGGAGGGGGGGCAGGCAGGGCTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTTTGGCCAAGTAGCTGGAGGAGGGGGGGCAGGCAGGGCTGCCC  200

seq1  CTTGACCACCCCCTGAAGAGTGGGATAGAGGAATGCCCACCCAGGGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCACCCCCTGAAGAGTGGGATAGAGGAATGCCCACCCAGGGATGA  250

seq1  GTGGATAGGGTAGGTAGCAGCCCTCCCACGCCTGACTGACCGTAGAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAGGGTAGGTAGCAGCCCTCCCACGCCTGACTGACCGTAGAATAG  300

seq1  GGAAACTCTGGTGGGGTGTGGGCATCTTTTTCCTTCAGTTCTTCCCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCTGGTGGGGTGTGGGCATCTTTTTCCTTCAGTTCTTCCCCAGG  350

seq1  GCCCCCCCTTTTCATTTTGTTCCCAACATGTATATGCTTTTTTTCTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCCTTTTCATTTTGTTCCCAACATGTATATGCTTTTTTTCTTTTA  400

seq1  AAAATGTCTTTACAATTTTTCATGCAAACTTTGCAGCTTGTTTATGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCTTTACAATTTTTCATGCAAACTTTGCAGCTTGTTTATGTTCA  450

seq1  TATTTTCCATAAATTTGTTTATAGAATCTTAAGAGTATTAATCCTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCATAAATTTGTTTATAGAATCTTAAGAGTATTAATCCTATATT  500

seq1  AAAACAAAATTGTCTGCTAAAAATAAATGATTTCTGTTTTTTTCAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATTGTCTGCTAAAAATAAATGATTTCTGTTTTTTTCAACAAA  550

seq1  TAGTTAGAAGCTAAAAGTCAAGCCCATTCTAACAGAAAACAAAAACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAAGCTAAAAGTCAAGCCCATTCTAACAGAAAACAAAAACTCAA  600

seq1  GGAAATGGTCCAATAGGTAAATTGTTTATCAGGTGAGGACTAAAGTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGTCCAATAGGTAAATTGTTTATCAGGTGAGGACTAAAGTTGAA  650

seq1  CCTCTGAGCTAAGACAGTGATTCACAAGCTAAGACAGTGACTCACATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGCTAAGACAGTGATTCACAAGCTAAGACAGTGACTCACATCCT  700

seq1  ATAGTAAAATGGAAGGAACAAATGGGAGAATTC  733
      |||||||||||||||||||||||||||||||||
seq2  ATAGTAAAATGGAAGGAACAAATGGGAGAATTC  733