BAC Information

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BAC

Clone NameB6Ng01-102B04
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,497
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B04.bB6Ng01-102B04.g
ACCDH911066DH911067
length4941,103
definitionDH911066|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B04, 5' end.DH911067|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatctttatttacgaagaggttcagtacagaacaggaactgcaaatcatg
taatgcaccttgcattctgcttttagaaacaaaacacacatggaaggagt
tacagaaacaaaatttggaagtgtgacgaaaggatggaccatctagtgat
tgccatatccagagatccatcccatgatcagcttccaaatgctgacacca
ttgcatacactagcaagattttgctgaaaagaccctgatatagctgtctc
ttgtgagactatgcctgccggggcctagcaaacacagaagtggatgctca
cagtcagctattgaatggaccacagggcccccaatggaggaactagagaa
agcacccaaggaactaaagggaactgcaaccctataggtggaacaacaat
atgaactaagcagtaccccggagctcttgtctctagctgcatatgtatca
aaagatggcctagtcggccatcactggaaagagaggcccattgg
gaattcttcactgaggaataccgaatggctgagaagcaatgttcaacatc
cttaatcatcaggggaatgcaaatcaaaacaaccctgagattccacctca
caccagtcagaatgactaagatcaaaaccttaggtgacagcagatactgg
taaggatgtggagaaagaggaacactcctccattgatggtgggattgcaa
gctcatacactctacagatcagtctggcggttcctcagaaaattggacat
agtactactggaagatccagcaatacctctcatgggcatatccagaagat
gttccaactggtaataaggacacatgctccactatgttcatagcagcctt
atttttaatagccagaaactagaaagaacccagatgtccctcaacagggg
aatggttacagaaaatgtgatacatttacacaacagagtactactcagct
attaaaaacaatggatttatgaaattcttagacaaatggatggaactgaa
gaatatcattttgagtgaggtaacccaatcacaaaagaatacacaggata
tacagtcactgataagtggatattagcccagaagctcagaatccttcact
gaaaggggaacaaaacacccatggaaggatttatatagacaaagttcgaa
tcagagagtgaagaaatgaccatccagaaattgccccacttggggatcca
tcccataaacaaccaccaaacccagacagtatgacagatgccaataagag
gtttgtggacaggaacctgatagaactttctcttgaggggctctcccagt
gcttggcaaatacagaagtggatgctcccaatcatccattgcatggagca
caatgtccccagtgaaggagcaataaaatttacccaggaaaacatcaata
tgaactaaccagtacccccagagctccttgcaactaaaccaccagtcaaa
gaaaacacatggtgtattttttggctctagctgcaaatgtagcagagatg
gcaagtcgtcatcaatgggaatagagccctagtcctgtgaagtctatgcc
cagtatagggcatgccagaccaggatgggagtaggtggggttgtaaaaaa
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870497
seq2: B6Ng01-102B04.b_390_541

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||| ||||||||| ||||||||| |||||||||||||||||||
seq2  CTAGAGAAAGCACCCAAGGAACTAAAGGGAACTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| |||||||||| || |||||| ||||||||| |||| |||||||
seq2  ACAACAATATGAACTAAGCAGTACCCCGGAGCTCTTGTCTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GG  152
      ||
seq2  GG  152