BAC Information

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BAC

Clone NameB6Ng01-112E22
ChromosomeY (Build37)2 (Build37)
Map Location 1,120,568 - 1,120,964122,451,498 - 122,451,628
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112E22.bB6Ng01-112E22.g
ACCDH918405DH918406
length603164
definitionDH918405|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E22, 5' end.DH918406|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,568 - 1,120,964)(122,451,498 - 122,451,628)
sequence
gaattcactattcagcccagactagccttgaacttgcaattctcctgtct
cggattcctgaaattgctggagtgttgaaccatcattctttttttttttt
tttttttttttttttttttttttttcctttccattttttattaggtattt
agctcatttacatttccaatgctataccaaaagtcccccatacccaccca
cccccactcccctacccgcccactccccctttttggccctggcgttcccc
tgttctggggcatataaagtttgtgtgtccaatgggcctctctttccagt
gatggccgactaggccatcttttgatacatatgcagctaaagtcaagagc
tccggggtacgggttagttcataatgttgatccacctatagggttgcaaa
tccctttagctccttggctactttccctagctcctccattgggagccctg
tgatccatccattagctgactgtgggcatccacttctgtgtttgctaggc
cccggcatagtctcgcaagaaacagctacatctgggtcctttcgaaaaaa
tcttgctagtgtatgcaatggtgtcagcgtttggatgctgattatggggt
gga
gaattcttaggaacaactccttcaagaatggcatcaagtgctagcggtgg
ttcaggttgagccctgaggagaagtggggtggggggatgagtgacatatt
cccctcagagcacatttaatgtctaaaatccaagattcttgtgatgaaac
atgctgggcagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120568_1120964
seq2: B6Ng01-112E22.b_146_542

seq1  TTTTTTTTTTTTTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTTAAC  50
      ||||||||||||||||  ||||  |||||||||||||||||||||||| |
seq2  TTTTTTTTTTTTTTTTTTTTTTCCTTTCCATTTTTTATTAGGTATTTAGC  50

seq1  TCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACCCACCC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCC  100

seq1  CCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTATTCCCCTGT  150
      |||||||||| ||| ||||||||||||||||||||||||  |||||||||
seq2  CCACTCCCCTACCCGCCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGT  150

seq1  ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGAT  200
       |||||||||||||||||||   |||||||||||||||||||||||||||
seq2  TCTGGGGCATATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGAT  200

seq1  GGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCC  250
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  GGCCGACTAGGCCATCTTTTGATACATATGCAGCTAAAGTCAAGAGCTCC  250

seq1  GGGGTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGGTTGGAGATCC  300
      ||||||| |||||| |||||| |||| |||||||||||||||| | ||||
seq2  GGGGTACGGGTTAGTTCATAATGTTGATCCACCTATAGGGTTGCAAATCC  300

seq1  CTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTATGA  350
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  CTTTAGCTCCTTGGCTACTTTCCCTAGCTCCTCCATTGGGAGCCCTGTGA  350

seq1  TCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTGGGC  397
      ||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  TCCATCCATTAGCTGACTGTGGGCATCCACTTCTGTGTTTGCTAGGC  397

seq1: chr2_122451498_122451628
seq2: B6Ng01-112E22.g_68_205

seq1  GAATTCTTAGGAACAACTCCTTCAAGAATGGCATCAAGTGCTAGCGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGAACAACTCCTTCAAGAATGGCATCAAGTGCTAGCGGTGG  50

seq1  TTCAGGTTGAGCCCTGAGGAGAAGTGGGGTGGGGGGATGAGTGACTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||| | | 
seq2  TTCAGGTTGAGCCCTGAGGAGAAGTGGGGTGGGGGGATGAGTGACATATT  100

seq1  CCCCGAGAGAGCACATTT----TCCCA----CAAGATTC  131
      ||||   |||||||||||    ||  |    ||||||||
seq2  CCCC-TCAGAGCACATTTAATGTCTAAAATCCAAGATTC  138