BAC Information

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BAC

Clone NameB6Ng01-112O22
ChromosomeY (Build37)10 (Build37)
Map Location 573,321 - 573,3655,922,328 - 5,923,445
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112O22.bB6Ng01-112O22.g
ACCDH918860DH918861
length5001,120
definitionDH918860|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O22, 5' end.DH918861|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,365)(5,922,328 - 5,923,445)
sequence
gaattctcacctgaggaataccgaatggctgaaaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctatctcaagatataagatataagatacaatttgcaaaacacatgaagc
tcgggaagaacaaagaccaaggtgtggatactttgccccttcttggaatt
gggagcaaggcgcccatggaaggagctacagagacagagtttggagctaa
gatgaaaggatggaccatctagagactgccatacccagggatccatccca
taatcagcctccaaacgctgacaccattgcatacactagcaagattttgc
tgaaaggaccctcatatagctgtctcttgtgagactatgctggggcctag
caaacacagaagtggatgttcacagtcatctattggatggatcacagggc
ccccaatggaggagctagagaaagtacccaaggagctgaaggggtctgca

gaattcctttcagccatcttaacatctgctcacatcatggcaggcctctt
tggagcccctcatgtctatgccataagcacactgctgcctgcaagctgta
agctgccattcccacctttggctcccttgacccttggatggtagcgtttt
catgttttccctgtcagttgtctgcaagaggagggtgcttctgatcctca
cattcactagttgcagctgtctgacttggtttcttctggagttacaaagt
tgcgagctctgcgtgctaagcagtccaccctgggtcctctggaagagcag
ccagtgctctcgactgctgagccatctctagcccttgctcagttgcttcc
attgggttactccctgcacttctgagtgggtatctccttggtgtgacatt
ctgcgtggacactgaagtctccttccatttactcctgtgctgcttatgaa
atagagcagaaagtgtaactgacccagaagaggctaggctggctgaatcc
atccttcgggaagttgagagttaggccaggggagtgggaagaaccaaaga
gacaactccagctgggttccttacgggaatgacagagcatggtgggggag
gctggcatctgatgtggccgaggagacagtaaatactgaacagttctgag
cagtttatcaacagtcccatgaagtaagcatttcattaatgaaatacatt
ttctcccaaactttttgtctgaaatccttatttttggttttctgtgacat
cagctctgatgctgatagctttcaaacttttgaccatatttctaattttt
tacagctgggtggtagtggcatattcctttcatcctagcacttgggaggc
agaggtaggcggatcccggagtttaaggccagcctggtctgtagactgag
cttcagaacacagagaaaccctgtctcacaaaaaagaaaatggaaagaag
gaaagactgaaagaaaggaaagaaagaaagaaattatttttacatgccta
ggtgagtgatacacaatgcatacattaaaacagagtgtgtatgtcagaaa
agcctgtgttattattggctcctagggaataatgcctctgccgttacttc
ctgactgttagttttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573365
seq2: B6Ng01-112O22.b_502_546

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCA  45
      |||||||||||||||||||||||||||||||| ||||| ||||||
seq2  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCA  45

seq1: chr10_5922328_5923445
seq2: B6Ng01-112O22.g_67_1186

seq1  GAATTCCTTTCAGCCATCTTAACATCTGCTCACATCATGGCAGGCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCAGCCATCTTAACATCTGCTCACATCATGGCAGGCCTCTT  50

seq1  TGGAGCCCCTCATGTCTATGCCATAAGCACACTGCTGCCTGCAAGCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCCCTCATGTCTATGCCATAAGCACACTGCTGCCTGCAAGCTGTA  100

seq1  AGCTGCCATTCCCACCTTTGGCTCCCTTGACCCTTGGATGGTAGCGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCATTCCCACCTTTGGCTCCCTTGACCCTTGGATGGTAGCGTTTT  150

seq1  CATGTTTTCCCTGTCAGTTGTCTGCAAGAGGAGGGTGCTTCTGATCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTCCCTGTCAGTTGTCTGCAAGAGGAGGGTGCTTCTGATCCTCA  200

seq1  CATTCACTAGTTGCAGCTGTCTGACTTGGTTTCTTCTGGAGTTACAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTAGTTGCAGCTGTCTGACTTGGTTTCTTCTGGAGTTACAAAGT  250

seq1  TGCGAGCTCTGCGTGCTAAGCAGTCCACCCTGGGTCCTCTGGAAGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGCTCTGCGTGCTAAGCAGTCCACCCTGGGTCCTCTGGAAGAGCAG  300

seq1  CCAGTGCTCTCGACTGCTGAGCCATCTCTAGCCCTTGCTCAGTTGCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTCTCGACTGCTGAGCCATCTCTAGCCCTTGCTCAGTTGCTTCC  350

seq1  ATTGGGTTACTCCCTGCACTTCTGAGTGGGTATCTCCTTGGTGTGACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTTACTCCCTGCACTTCTGAGTGGGTATCTCCTTGGTGTGACATT  400

seq1  CTGCGTGGACACTGAAGTCTCCTTCCATTTACTCCTGTGCTGCTTATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGGACACTGAAGTCTCCTTCCATTTACTCCTGTGCTGCTTATGAA  450

seq1  ATAGAGCAGAAAGTGTAACTGACCCAGAAGAGGCTAGGCTGGCTGAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCAGAAAGTGTAACTGACCCAGAAGAGGCTAGGCTGGCTGAATCC  500

seq1  ATCCTTCGGGAAGTTGAGAGTTAGGCCAGGGGAGTGGGAAGAACCAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCGGGAAGTTGAGAGTTAGGCCAGGGGAGTGGGAAGAACCAAAGA  550

seq1  GACAACTCCAGCTGGGTTCCTTACGGGAATGACAGAGCATGGTGGGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTCCAGCTGGGTTCCTTACGGGAATGACAGAGCATGGTGGGGGAG  600

seq1  GCTGGCATCTGATGTGGCCGAGGAGACAGTAAATACTGAACAGTTCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATCTGATGTGGCCGAGGAGACAGTAAATACTGAACAGTTCTGAG  650

seq1  CAGTTTATCAACAGTCCCATGAAGTAAGCATTTCATTAATGAAATACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATCAACAGTCCCATGAAGTAAGCATTTCATTAATGAAATACATT  700

seq1  TTCTCCCAAACTTTTTGTCTGAAATCCTTATTTTTGGTTTTCTGTGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAAACTTTTTGTCTGAAATCCTTATTTTTGGTTTTCTGTGACAT  750

seq1  CAGCTCTGATGCTGATAGCTTTCAAACTTTTGACCATATTTCTAATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGATGCTGATAGCTTTCAAACTTTTGACCATATTTCTAATTTTT  800

seq1  TACAGCTGGGTGGTAGTGGCATATTCCTTTCATCCTAGCACTTGGGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGGGTGGTAGTGGCATATTCCTTTCATCCTAGCACTTGGGAGGC  850

seq1  AGAGGTAGGCGGATCCCGGAGTTTAAGGCCAGCCTGGTCTGTAGACTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGGCGGATCCCGGAGTTTAAGGCCAGCCTGGTCTGTAGACTGAG  900

seq1  CTCCAGAACACAGAGAAACCCTGTCTCACAAAAAAGAAAAAGGAAAAGAA  950
      || ||||||||||||||||||||||||||||||||||||| ||||   | 
seq2  CTTCAGAACACAGAGAAACCCTGTCTCACAAAAAAGAAAATGGAA---AG  947

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAGAAAATTATTTTA  1000
      ||| ||||  |   ||||||| |||   | ||||||||||| |  |||||
seq2  AAGGAAAG--ACTGAAAGAAAGGAA---AGAAAGAAAGAAATTATTTTTA  992

seq1  CATGCCTA-GTGAGTGATACACAATGCATACAT--AAACAGA-TGTGTAT  1046
      |||||||| ||||||||||||||||||||||||  ||||||| |||||||
seq2  CATGCCTAGGTGAGTGATACACAATGCATACATTAAAACAGAGTGTGTAT  1042

seq1  GTCAGAAA--GCTGTG-TAATATTTGCTCCTA-GGAATAATG-CTCTGCA  1091
      ||||||||   ||||| || |||| ||||||| ||||||||| |||||| 
seq2  GTCAGAAAAGCCTGTGTTATTATTGGCTCCTAGGGAATAATGCCTCTGCC  1092

seq1  G-TACTTCCTGACTGTTAGTTTTGTTTT  1118
      | ||||||||||||||||||||||||||
seq2  GTTACTTCCTGACTGTTAGTTTTGTTTT  1120