BAC Information

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BAC

Clone NameB6Ng01-120F15
ChromosomeY (Build37)
Map Location 573,746 - 573,929
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F15.bB6Ng01-120F15.g
ACCDH924317DH924318
length211810
definitionDH924317|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F15, 5' end.DH924318|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acagggaaatcatcactcagggacttcaggcagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtgctg
gaattcagaaatcctcccatccctgcctccctaggactgggaataaaggc
ttgagccaccactcccgggtatatttaatttttttaatttttaaatttta
tttgttttatttatttttcttttttttcaagatgtggtttctctgtgtaa
ccctggctgtcctggaactcactctgtagaccaggctggccttgaaccat
taatctgaacgtttttgcttcccaaatgctgggattagaggcatgtgaca
ccactgcccggattaattttatttgtttgaaaataccttccttccttcct
ccttccttcctcccttttctttctttctttctttctttctttctttcttt
ctttctttctttcttttttctctctctctttctctctttctattagtttt
ttttttgttttgttttgtttttttggagatatggtttctctagtcctagc
tgacttgtaagccagggtgaccttgaaagcagaaatctgccttctttctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
ttccaaaaatgctcagggacatcactctccctccagccagagaagagtct
caggaaatgtatgtgagcttgcttttgctttgttttgtggggccaaatgt
gacagacatttcttttggctttgtgtgtttgccagccagctctcttgctc
ttgctcactcactcactcactcactcactcactcactcattcactcatta
gcttgcttactgtggttttcacttctatctatctctgcagggttccaaga
ctgccccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573746_573929
seq2: B6Ng01-120F15.g_138_560

seq1  TATATTTAATTAAGTTTATATAGTATGTAGTACATTCTCAAATTTTTAAA  50
      |||||||||||   ||| |                     ||||||||||
seq2  TATATTTAATT---TTTTT---------------------AATTTTTAAA  26

seq1  TTTTGTGAAAAACTCTATCACTTTTTTTTTTTTTTTTTTTTTGGTGTTTT  100
      ||||                 ||| |||| ||| ||||| ||  | ||||
seq2  TTTT----------------ATTTGTTTTATTTATTTTTCTT--TTTTTT  58

seq1  CGAGATAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGT  150
      | ||||  ||||||||||| || |||||||||||||||||||||||||||
seq2  CAAGATGTGGTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTCACTCTGT  108

seq1  AGACCAGGCTGGCCACGAACTCAGAAATCTG--CCT--------------  184
      ||||||||||||||  |||| ||  ||||||  | |              
seq2  AGACCAGGCTGGCCTTGAAC-CATTAATCTGAACGTTTTTGCTTCCCAAA  157

seq1  --------------------------------------------------  184
                                                        
seq2  TGCTGGGATTAGAGGCATGTGACACCACTGCCCGGATTAATTTTATTTGT  207

seq1  --------------------------------------------------  184
                                                        
seq2  TTGAAAATACCTTCCTTCCTTCCTCCTTCCTTCCTCCCTTTTCTTTCTTT  257

seq1  --------------------------------------------------  184
                                                        
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTCTCTC  307

seq1  --------------------------------------------------  184
                                                        
seq2  TCTTTCTCTCTTTCTATTAGTTTTTTTTTTGTTTTGTTTTGTTTTTTTGG  357

seq1  --------------------------------------------------  184
                                                        
seq2  AGATATGGTTTCTCTAGTCCTAGCTGACTTGTAAGCCAGGGTGACCTTGA  407

seq1  ----------------  184
                      
seq2  AAGCAGAAATCTGCCT  423