BAC Information

Click to search

BAC

Clone NameB6Ng01-122L21
Chromosome2 (Build37)Y (Build37)
Map Location 77,093,256 - 77,093,7901,870,346 - 1,870,544
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePde11a, Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1
Downstream geneLOC623706, LOC667906, Zfp533, BC003993, LOC667920, OTTMUSG00000016703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122L21.bB6Ng01-122L21.g
ACCDH926088DH926089
length529491
definitionDH926088|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L21, 5' end.DH926089|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(77,093,256 - 77,093,790)(1,870,346 - 1,870,544)
sequence
aggctttcaagacaaaagcatggcaaaagagtgtcagatggcaatggaaa
catttgtttttctggaaagtgaggtctcaagaaggaagaacggaaatggc
atgctttatctatcgtatttagagctgcagttggaattgtttaaagtagc
agatactttattattccatcatagacttatgttaagatccacaatcccta
aaacaagaaagggctttttaaataggctggactctgacaaacagccttgg
gtggaggagaggcctttcacagtggcataaacaaagacaacgtgagacca
aagtaccagattctaccaaagcctatcaaaagcaacccaatacttactag
ttccaagtatcacaacccctacagtgatacatttcctccagcaaggccac
acctgctccaagaggccacacctcctaattgtgccattccctgggccaag
catattcaaaccaccacacctatcccctctgagtgttaaggtagactcat
cacaacattttggggggggtgttgggggg
tttgttcagttctgagccccattttttaagggggttatttgattttctga
ggtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccagtctgttggtggtctttttgt
cttatagacagtgtcttttgccttgcagaaactttggagtttcattaggt
cccattgtgagactatgccggggcctagcaaacacagaagtggatgctca
cagtcagctaatggatggatcacagggctcccaatggaggagctagagaa
agtacccaaggagctaaagggatcttcaaccctataggtggaacaacatt
atgaactaaccagtacccctgagctcttgactctagctgcatatgtatca
aaagatggcctagtcggccatcactggaaagagaggcccattggacacgc
agactttgtgtgccccggtacaggggaacgccagggccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77093256_77093790
seq2: B6Ng01-122L21.b_49_583 (reverse)

seq1  CCCCCCAACACCCCCCCCAAAATGTTGTGATGAGTCTACCTTAACACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAACACCCCCCCCAAAATGTTGTGATGAGTCTACCTTAACACTCA  50

seq1  GAGGGGATAGGTGTGGTGGTTTGAATATGCTTGGCCCAGGGAATGGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATAGGTGTGGTGGTTTGAATATGCTTGGCCCAGGGAATGGCACA  100

seq1  ATTAGGAGGTGTGGCCTCTTGGAGCAGGTGTGGCCTTGCTGGAGGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAGGTGTGGCCTCTTGGAGCAGGTGTGGCCTTGCTGGAGGAAATG  150

seq1  TATCACTGTAGGGGTTGTGATACTTGGAACTAGTAAGTATTGGGTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTGTAGGGGTTGTGATACTTGGAACTAGTAAGTATTGGGTTGCTT  200

seq1  TTGATAGGCTTTGGTAGAATCTGGTACTTTGGTCTCACGTTGTCTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGGCTTTGGTAGAATCTGGTACTTTGGTCTCACGTTGTCTTTGTT  250

seq1  TATGCCACTGTGAAAGGCCTCTCCTCCACCCAAGGCTGTTTGTCAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCACTGTGAAAGGCCTCTCCTCCACCCAAGGCTGTTTGTCAGAGTC  300

seq1  CAGCCTATTTAAAAAGCCCTTTCTTGTTTTAGGGATTGTGGATCTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTATTTAAAAAGCCCTTTCTTGTTTTAGGGATTGTGGATCTTAACA  350

seq1  TAAGTCTATGATGGAATAATAAAGTATCTGCTACTTTAAACAATTCCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTATGATGGAATAATAAAGTATCTGCTACTTTAAACAATTCCAAC  400

seq1  TGCAGCTCTAAATACGATAGATAAAGCATGCCATTTCCGTTCTTCCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTAAATACGATAGATAAAGCATGCCATTTCCGTTCTTCCTTCT  450

seq1  TGAGACCTCACTTTCCAGAAAAACAAATGTTTCCATTGCCATCTGACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTCACTTTCCAGAAAAACAAATGTTTCCATTGCCATCTGACACT  500

seq1  CTTTTGCCATGCTTTTGTCTTGAAAGCCTGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  CTTTTGCCATGCTTTTGTCTTGAAAGCCTGAATTC  535

seq1: chrY_1870346_1870544
seq2: B6Ng01-122L21.g_364_562

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCTGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAA  199
      ||||| ||| ||||| | |||||| ||||||||||||||||||||||||
seq2  GGACACGCAGACTTTGTGTGCCCCGGTACAGGGGAACGCCAGGGCCAAA  199