BAC Information

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BAC

Clone NameB6Ng01-123K08
ChromosomeY (Build37)
Map Location 1,120,586 - 1,121,031
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123K08.bB6Ng01-123K08.g
ACCDH926756DH926757
length962486
definitionDH926756|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K08, 5' end.DH926757|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctttgacccattggttgttcagaaacatgcaattttattttc
tttttttttttttccatttttttttaggtatttagctcatttacatttcc
aatgctataccaaaagtcccccttacccacccacccccactcccctaccc
acccactccccccctttggccctggcgttcccctgtaccggggcacacaa
agtctgcatgtccaatgggcctctctttccagtgatggccgactaggcca
tcttttgatacatatgcagctagagtcaagagctcaggggtactggttag
ttcataatgttgttccacctatagggttgaagatccctttagctccttgg
gtactttctctagctcctccattgggagccctgtgatccatccattagct
gactgtgagcatccacttctgtgtttgctaggccccggcatagtctcaca
agagacagctacatctgggtcctttcagtaaaatcttgctagtgtatgca
atggtgtcagcatttggaagctgattatggggtggatccctggatatggc
agtctctacatggtccatcctttcatctcagctccatactttgtttctgt
aactccttccatgggtgatttgttcccacttctaaggaggggcatagtgt
ccacacttcagtcttcattttttcttgagtttcatgtgtttaaggaaatt
gtatcttatatcgtgagtatcctaggttttgggctagtatccacttatca
gttgagtacatatttgttgtgagttccttttgtgatttgtgttacctcac
tcagatgatgctctccaggtccatcccatttgggctaggaatttcataaa
ttcattctttttttatagctgagtagtactccattgtgtagatgtaccaa
ttttctgtatccattcctctggtgagggcatcttggttctttccagtttc
tggctattataa
caggggtcatgtgatgtaaagtcttggcatgccactgtgacctgtggctt
ctaccctggtgatgtatgtaagatggggtttcaacactgagggagggccc
tacaaggcaaagggggcgcagatataggtggaggagaggagtgtcttgta
ctttccatgtgggtaagggtccatggagttcatgtaggaaaatgctaatg
ggaacagctgctaatatcagggagagagaagcacacaaaaagcattggga
ggagtcggggtggatgattaagggaaggaggtcagccgcatattggatgt
cttgtagctaggagagggagttccttctgagactgattttcccgttaaag
aatattaacatgggtaaaaactgatgtggaggtggggaaaagctcacggg
agacaggtaggtcagctatggggtattcggcatagctgataggatagagt
ttaccccatgactcctttcaccagctttcatcccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120586_1121031
seq2: B6Ng01-123K08.b_102_547

seq1  TTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAATG  50
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TTTTTTTTTCCATTTTTTTTTAGGTATTTAGCTCATTTACATTTCCAATG  50

seq1  CTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACCC  100
      |||||||||||||||||| || |||||||||||||||||||| |||||||
seq2  CTATACCAAAAGTCCCCCTTACCCACCCACCCCCACTCCCCTACCCACCC  100

seq1  ACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTT  150
      ||||||||  |||||||||||  ||||||||||| |||||| | ||||| 
seq2  ACTCCCCCCCTTTGGCCCTGGCGTTCCCCTGTACCGGGGCACACAAAGTC  150

seq1  TGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTT  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTT  200

seq1  TTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCA  250
      |||||| |||||||||||||||||||||||| |||||||||||||| |||
seq2  TTGATACATATGCAGCTAGAGTCAAGAGCTCAGGGGTACTGGTTAGTTCA  250

seq1  TAACGTTGTTCCACCTATAGGGTTGGAGATCCCTTTAGCTCCTTGGCTAC  300
      ||| ||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TAATGTTGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTTGGGTAC  300

seq1  TTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCCATCCATTAGCTGACT  350
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACT  350

seq1  GTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGCATAGTCTCACAAGAG  400
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAG  400

seq1  ACAGCTACATCTGCCTCCTTTCAATAAAATCTTGCTAGTGTATGCA  446
      |||||||||||||  |||||||| ||||||||||||||||||||||
seq2  ACAGCTACATCTGGGTCCTTTCAGTAAAATCTTGCTAGTGTATGCA  446