BAC Information

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BAC

Clone NameB6Ng01-127J18
ChromosomeY (Build37)
Map Location 1,870,361 - 1,870,579
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127J18.g
ACCDH929681
length247
definitionDH929681|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agtaagaatgttgccttttaagtgacattaaggagctaaagagatctgca
accctgtaggtacaacaacattatgaactaaccagtaccccggagctctt
gactctagctgcatatgtatcaaaagatggcttaattggccatcactgga
aagagaggcccattggacacgaaaactttatatgccccagtacaggggaa
tgccagggccaaaaaatgggaaagggtgggtagggaagtggggtggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870361_1870579
seq2: B6Ng01-127J18.g_103_320

seq1  AAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACT  50
      |||||||||||| ||||||||||||| |||||  ||||||||||||||||
seq2  AAGGAGCTAAAGAGATCTGCAACCCTGTAGGTACAACAACATTATGAACT  50

seq1  AACCATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATCAAAAGATG  100
      ||||| |||||| |||||||||||||| |||||||| |||||||||||||
seq2  AACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATG  100

seq1  GCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTT  150
      || || | |||||||||||||||||||||||||||||||| | |||||||
seq2  GCTTAATTGGCCATCACTGGAAAGAGAGGCCCATTGGACACGAAAACTTT  150

seq1  ATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTGGGTGG  200
      ||||||||||||||||||||| ||||||||||||||  || |  ||||||
seq2  ATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAAAATGGGAAAGGGTGG  200

seq1  GTAGGGGAGTGGGGGTGGG  219
      |||||| ||| ||||||||
seq2  GTAGGGAAGT-GGGGTGGG  218