BAC Information

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BAC

Clone NameB6Ng01-131K17
ChromosomeY (Build37)
Map Location 573,321 - 573,401
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131K17.bB6Ng01-131K17.g
ACCDH932668DH932669
length1,239500
definitionDH932668|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K17, 5' end.DH932669|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagtattgctttttgtggatggtatgctagtatacatgagtga
ccacaagatttctaccagaaaactcctacagctgataaacactttcagca
aagtggctagatgcaacactagcttaaagaaatcaatagccctctttcat
accattttatttcatttggtaaagaggccaagaaagaaattagagaaaca
agccccttcacaatagccaacaataatataaaataccttgatataactct
gtatgacaataacttcaagtccctgaagaaaataattgaagaagacatct
gaagatggaaaaaattctcattttcatggacagataagattaacataatg
aaaattgccatttttccaaaagcaatctacagattcaatgtgatccccat
caaaatgtcaacataatttttatagatcttgaaagagcaattctcaactt
gatatgttaaaacaaaaatcccataatagccaaaacaatcctgacaataa
aagaaattctagtagaatcactgtccctgatctcaagctgtactacagaa
caatagtgttaaaaattgcatggtgttggtatagatacagacactttgat
cagtaatcaaagcaaacacccagaaataaacccacatacctatggacact
ttttttttaatataaagcagcaaaaagtacacagtggaaaaaagaaagca
tctttaataaattttactggtctaactggttaataacctaaacataaaac
tgtatagactgaggctaatagaaaagaaagtggaaaattctcttgaactg
attagtacaggagaaagtttctgaaacagaaccaatgtctcagctctaag
atcaataagtgggacctcttgaaacttagaagcttcagtaaggcaaagga
tactgtcaataggacaaaatggcagactacagatagcagatagtagatag
ggaaaggattttcatcaaccctacatctgactgagatgatattcatatgt
ataaaaactcagaagtagacaccaacacataaataacccaatttaaaatg
agtaaggagctatcagtgaatctccacgaggatattcaatggccagaagc
actttaaaaaatgttcagttacttagtcctcagcgaatgctaccaagcca
gccaatcaatctgttgaggatgtggaagtacatggatcatttcagcttaa
caagatatctggaatttgccgaacatgaatggaatttgc
gaattcctgatctttccaaaacttttttcatgaatgggtgtttaatcttg
tcaaatgctttttctgcatctaacgagatgatcataagatacaatttgct
aaacacatgaaactcaagaagaatgaagactgaagtgtggacactatgcc
cctccttagaattgggaacaaaacacccatggaaggagttacagagacaa
agtttggagctgagatgaaaggatggaccatgtagagactgccatatcca
gggatccaccccataatcagcatccaaacgctgacaccattgcatacact
accaagattttatcgaaaggacccagatgtagctgtctcttgtgagacta
tgccggggcctagcaaacacagaagtcgatgctcacagtcagctaatgga
tggatcacagggctcccaatggaggagctagagaaagaacccaaggagct
aaagggatatgcaaccctataggtggaacaacattatgaactaaccagta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573401
seq2: B6Ng01-131K17.g_488_569

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      ||||||||||||||||||| |||||||||||||||||||| ||||| |||
seq2  ATGGAGGAGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATATGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTA  81
      |||| |||||||||| |||||| |||||||||
seq2  ATAGGTGGAACAACATTATGAACTAACCAGTA  82