BAC Information

Click to search

BAC

Clone NameB6Ng01-131P20
ChromosomeY (Build37)
Map Location 1,120,586 - 1,121,079
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131P20.bB6Ng01-131P20.g
ACCDH932910DH932911
length949973
definitionDH932910|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P20, 5' end.DH932911|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttttttttcattttttattatgtatttagcccatttacattt
ccaatgctataccaaaagtcccccatacccacccacccccactcccctac
ccacccactccccctttttggccctggcatttccctgtactggggcatat
aaagtttgcatgtccaatgggcctctctttccagtgttggccgactaggc
catcttttgatacatatgcagctagagtcaagagctccggggtactggtt
agttcataatgttgttccacctatagggttgcagatccctttagctcctt
gggttctttctctagctcctccattgggagccctgtgatccacccattag
ctgactgtgagcatccacttctgtgtttgctaggccccggcatattctca
caagagacagctacatctgggtcctttcgataaaatcttgctagtgtatg
caatggtgtcagcgtttggatgctgattatggggtggatccctggatatg
gcagtctctacatggtccatcctttcatctcagctccaaactttgtctct
gtaactccttccaagggtgttttgttcccacttctaaggaggggcatagt
atccacacttcagtcttcatttttcttgagtttcatgtgtttaggaaatt
gtatcttatatctttgggtatcctaggttttgggctaatatccacttatc
agtgagtacatattgtgtgagttcctttgtgaatgtgttacctcactcaa
gatgatgccctccaagtccatccatttggctaggaatttcataaattcat
tcttttaaatagctgagtagtactccattgtgtagatgtaccacattttc
tttgtttagctctgagccccatttttaatagggttattgtttttctggag
tccacttcttgagttctttatatatatggatatagtcccctatctgatt
gaattctttggtttctccatctatggtaattgagagtttggctgggtata
gtagcctggactggcatttgttttctcttagtgtctgtataacatctgtc
caggatcttctggctttcatagtctctggtgaaaagtctggtgtaatact
gataggcctgcctttagatgttacttgacctttttcccttactgctttta
atattctatgtttatttagtgcattttttctgattattatgtgtcaggag
gaatttcttttctggtccagtgtatatggagttctttacgctttttgtat
gttcatgggcatctctttgtttaggtttgggaagttttcttctataattt
tattgaagatatttgctggccctttaatttgaaaatcttcattctcatct
actcctattatcaggaggtttgatcttctcattgtgtcctggatttcctg
gatgttttgagttagcatctctttgcattttgcattttctttgttgtgct
gatgttctctatggaatcttcttcacctgagattctttcttccatctctt
gtattctgttgctgatactcgtatctatgtttccagatttcttccctagg
gtttctatctccagcgttgcctcactttgcattttcgttattgtgactac
ttccctttttaggtctagtatggttttgttcatttccatcacctgttttg
gatgtgttttcctgtttttctttaatgacttctatgtgtttggtttgttt
ttgtgtttttctttaaggtcttgtaactctttagcagtgttctcctgtat
ttctttaagtgagttattaaagtccttcttgatgtcctctaccatcatca
tgagatatgcttttaaacccagttctagcttttaggtgtgttggggtacc
aagactggtgaggtgggagtgctgcgtcttatgatggtgagtggcctgat
tcttgttagaagattctttatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120586_1121079
seq2: B6Ng01-131P20.b_57_550

seq1  TTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAATG  50
      ||||||||| |||||||||||| ||||||| | |||||||||||||||||
seq2  TTTTTTTTTTCATTTTTTATTATGTATTTAGCCCATTTACATTTCCAATG  50

seq1  CTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACCC  100
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  CTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCC  100

seq1  ACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTT  150
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  ACTCCCCCTTTTTGGCCCTGGCATTTCCCTGTACTGGGGCATATAAAGTT  150

seq1  TGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTT  200
      |||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCATGTCCAATGGGCCTCTCTTTCCAGTGTTGGCCGACTAGGCCATCTT  200

seq1  TTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCA  250
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCA  250

seq1  TAACGTTGTTCCACCTATAGGGTTGGAGATCCCTTTAGCTCCTTGGCTAC  300
      ||| ||||||||||||||||||||| |||||||||||||||||||| | |
seq2  TAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTTC  300

seq1  TTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCCATCCATTAGCTGACT  350
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  TTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCACCCATTAGCTGACT  350

seq1  GTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGCATAGTCTCACAAGAG  400
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  GTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATATTCTCACAAGAG  400

seq1  ACAGCTACATCTGCCTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGG  450
      |||||||||||||  ||||||| |||||||||||||||||||||||||||
seq2  ACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAATGG  450

seq1  TGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGCTATG  494
      ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATG  494