BAC Information

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BAC

Clone NameB6Ng01-132C16
ChromosomeY (Build37)1 (Build37)
Map Location 1,120,568 - 1,120,721151,992,040 - 151,992,930
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C16.bB6Ng01-132C16.g
ACCDH933040DH933041
length505890
definitionDH933040|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C16, 5' end.DH933041|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,568 - 1,120,721)(151,992,040 - 151,992,930)
sequence
gaattctttgttcagttctgagccccatgttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttttttttttttttttttttttt
ttttttgaagtgcatacattatttagattttttattttttcagtgttctt
tgtctactccatgattccatcgaggggggtgatatcctgacttctttttt
tttttttttttttttttttttttccattttttattagggatttagctcat
ttacatttccaatggtataccaaaaaaaccccttacccacccacccccac
tcccctacccacccactccccccctttggccctggggttcccctgtaccg
gggca
gaattccttctacaataataatagatgaatttcagagacttagggaaggt
caaatttgtaggtgaaagcctacaaaagttcaatgttttatgtattaaga
tgtttcttgaacaagataaaccagtttcctttttcttaggcaaaagtgtc
tgtgaccaagaaaacaataggggcaaatcaaagatttgcgagccattgcc
attcagttggcagtctaggtacaggattggaaaaaaacgcatcccagaga
aatgcaaaccgaagagacgtgaatcactgccattgcacaatagctgagtc
actcttgagtctgtctcctgatgatacttgaaaaggggcggtttggggag
cacggtgctcaatgatacaaccctagatggagagcttgcctgacatgtgc
tggatggtgtgggttcagttctcacactgaatatgtggagctctgtggga
aggctggtaatataggtcgtgaagcaatctacgaagtgcatgaccagcca
aggagaattttcttgtagtgtggttctagggagcatcctgcatgcttctg
aggagagtttccagagagggagccatgctgctgagaggctggaagttcct
tcgaggcaggcaaaaggaagggtttatctggtcttgccatcatcaaattc
ctgtatgggcccctatctgaggaggctggtggtccattcgctgtcttgtt
gaatggtaaattttaccgtgtgagttgtttttcatcagactggtcatttg
tgtaagaggccatggtcaatagaggttaaagatgtctttggaaggcatcc
atcatgcattgggttccaaatggcttacatctgattataaaatatgagaa
gggagaagctgtgtgaggaggggactgggaggaggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120568_1120721
seq2: B6Ng01-132C16.b_395_546

seq1  TTTTTTTTTTTTTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTTAAC  50
      ||||||||||||||||  |||||||||||||||||||||||| ||||| |
seq2  TTTTTTTTTTTTTTTT--TTTTTTTTTCCATTTTTTATTAGGGATTTAGC  48

seq1  TCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACCCACCC  100
      |||||||||||||||||| ||||||||||   |||| || ||||||||||
seq2  TCATTTACATTTCCAATGGTATACCAAAAAAACCCCTTACCCACCCACCC  98

seq1  CCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTATTCCCCTGT  150
      |||||||||| |||||||||||||||  |||||||||||  |||||||||
seq2  CCACTCCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGGGTTCCCCTGT  148

seq1  ACTG  154
      || |
seq2  ACCG  152

seq1: chr1_151992040_151992930
seq2: B6Ng01-132C16.g_67_956

seq1  GAATTCCTTCTACAATAATAATAGATGAATTTCAGAGACTTAGGGAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTACAATAATAATAGATGAATTTCAGAGACTTAGGGAAGGT  50

seq1  CAAATTTGTAGGTGAAAGCCTACAAAAGTTCAATGTTTTATGTATTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGTAGGTGAAAGCCTACAAAAGTTCAATGTTTTATGTATTAAGA  100

seq1  TGTTTCTTGAACAAGATAAACCAGTTTCCTTTTTCTTAGGCAAAAGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTGAACAAGATAAACCAGTTTCCTTTTTCTTAGGCAAAAGTGTC  150

seq1  TGTGACCAAGAAAACAATAGGGGCAAATCAAAGATTTGCGAGCCATTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAAGAAAACAATAGGGGCAAATCAAAGATTTGCGAGCCATTGCC  200

seq1  ATTCAGTTGGCAGTCTAGGTACAGGATTGGAAAAAAACGCATCCCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTGGCAGTCTAGGTACAGGATTGGAAAAAAACGCATCCCAGAGA  250

seq1  AATGCAAACCGAAGAGACGTGAATCACTGCCATTGCACAATAGCTGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAACCGAAGAGACGTGAATCACTGCCATTGCACAATAGCTGAGTC  300

seq1  ACTCTTGAGTCTGTCTCCTGATGATACTTGAAAAGGGGCGGTTTGGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAGTCTGTCTCCTGATGATACTTGAAAAGGGGCGGTTTGGGGAG  350

seq1  CACGGTGCTCAATGATACAACCCTAGATGGAGAGCTTGCCTGACATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGCTCAATGATACAACCCTAGATGGAGAGCTTGCCTGACATGTGC  400

seq1  TGGATGGTGTGGGTTCAGTTCTCACACTGAATATGTGGAGCTCTGTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGTGTGGGTTCAGTTCTCACACTGAATATGTGGAGCTCTGTGGGA  450

seq1  AGGCTGGTAATATAGGTCGTGAAGCAATCTACGAAGTGCATGACCAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTAATATAGGTCGTGAAGCAATCTACGAAGTGCATGACCAGCCA  500

seq1  AGGAGAATTTTCTTGTAGTGTGGTTCTAGGGAGCATCCTGCATGCTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATTTTCTTGTAGTGTGGTTCTAGGGAGCATCCTGCATGCTTCTG  550

seq1  AGGAGAGTTTCCAGAGAGGGAGCCATGCTGCTGAGAGGCTGGAAGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTTTCCAGAGAGGGAGCCATGCTGCTGAGAGGCTGGAAGTTCCT  600

seq1  TCGAGGCAGGCAAAAGGAAGGGTTTATCTGGTCTTGCCATCATCAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGCAGGCAAAAGGAAGGGTTTATCTGGTCTTGCCATCATCAAATTC  650

seq1  CTGTATGGGCCCCTATCTGAGGAGGCTGGTGGTCCATTCGCTGTCTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGGCCCCTATCTGAGGAGGCTGGTGGTCCATTCGCTGTCTTGTT  700

seq1  GAATGGTAAATTTTACCGTGTGAGTTGTTTTTCATCAGACTGGTCATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTAAATTTTACCGTGTGAGTTGTTTTTCATCAGACTGGTCATTTG  750

seq1  TGTAAGAGGCCATGGTCAATAGAGGTTAAAGATGTCTTTGGAAGGCATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAGGCCATGGTCAATAGAGGTTAAAGATGTCTTTGGAAGGCATCC  800

seq1  ATCATGCATTGGGTTCCAAATGGCTTACATCTGATTATAAAAATATGAGA  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCATGCATTGGGTTCCAAATGGCTTACATCTGATTAT-AAAATATGAGA  849

seq1  AGGGAGAAGCTGTGTGAGGAGGGGACTGGGAGGAGGGGAGG  891
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAAGCTGTGTGAGGAGGGGACTGGGAGGAGGGGAGG  890