BAC Information

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BAC

Clone NameB6Ng01-141O12
ChromosomeY (Build37)4 (Build37)
Map Location 573,321 - 573,35629,905,017 - 29,905,876
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141O12.bB6Ng01-141O12.g
ACCDH940240DH940241
length500938
definitionDH940240|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O12, 5' end.DH940241|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,356)(29,905,017 - 29,905,876)
sequence
gaattccttgccaaatggatggacctggagggcatcatcctgagtgaggt
aacacaatcacaaaggaactcacacaatatgtactcactgataagtggat
attagcccaaaacctaggatacccaagatataagatacaatttgctaaac
acatgaaactcaagaagaatgaagactgaagtgtggacactgtgcccctt
cttagacttgggaacaaaacgcccatggaaggagttacagagacaaagtt
tggagctgtgacgaaaggatggaccatgtagagactgccatatccaggga
tccaccccataatcagcttccaaacgctgacaccattgcatacactagca
agattttgctgaaaggacccagatatagctgtctcttttgagactatgcc
agggcctagcaaacacagaagtggatgctcacagtcaactagtggatgga
tcacagggctcccaatggaggagctagaaaaagtacccaaggagctaaag

gaattccaggactacatagtgagactctgtcaataaattataaatacatt
taattaattaaatgattaattaattaattaataaaacaacgaacaacaca
aatcccaagaaggcaggataccacctgaaaatatgtgattttggtagaga
gttcaggaagagctgcatagagacaaacactccaaattgtgtacattaaa
catatgcaggtttatacattgactatgtgttggttaagtattgtaaactc
tgctgccttgaatgtctcacaaaataattccaagttttctgcattagcaa
cctaatagttgaatcctgggatatcctacaagatgaaagttaactcaatc
aattattttctctttttatattagttggcatataaaaattttacatgtga
atggggtgctatgagatagcttgttatataaatacattttatgctgatta
aaatagggtaattttcttatgcttaccttgaatatttgttacttgtgaca
agaagattaaatccctgccttctacctttcttaaatcccttccttgtacc
atgcttaaatatacaataaatgaatattgattctaggtattctacttact
atgacattcaataccagaaattgtatctaatgcctatctgtaggactata
tcagcttattaccctttcctcatacaccgtgcctcaagtctcagggtccc
atcattttccacacatcctataagatgaaatattttaaattccacctgtg
gctaatctcaatatttcattttactaaattcaatgttctacaagatcagc
aatattgttacaaatgacaggatttcatattttatgagaaatttatattc
catggtatatgtattcaattatcattattcattattgatggatacaggtt
aattcactaccttaggtatcataaatgctctttcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573356
seq2: B6Ng01-141O12.b_513_548

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAG  36
      |||||||||||||| |||||||||||||||||||||
seq2  ATGGAGGAGCTAGAAAAAGTACCCAAGGAGCTAAAG  36

seq1: chr4_29905017_29905876
seq2: B6Ng01-141O12.g_70_929

seq1  GAATTCCAGGACTACATAGTGAGACTCTGTCAATAAATTATAAATACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTACATAGTGAGACTCTGTCAATAAATTATAAATACATT  50

seq1  TAATTAATTAAATGATTAATTAATTAATTAATAAAACAACGAACAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTAAATGATTAATTAATTAATTAATAAAACAACGAACAACACA  100

seq1  AATCCCAAGAAGGCAGGATACCACCTGAAAATATGTGATTTTGGTAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAAGAAGGCAGGATACCACCTGAAAATATGTGATTTTGGTAGAGA  150

seq1  GTTCAGGAAGAGCTGCATAGAGACAAACACTCCAAATTGTGTACATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGAAGAGCTGCATAGAGACAAACACTCCAAATTGTGTACATTAAA  200

seq1  CATATGCAGGTTTATACATTGACTATGTGTTGGTTAAGTATTGTAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGGTTTATACATTGACTATGTGTTGGTTAAGTATTGTAAACTC  250

seq1  TGCTGCCTTGAATGTCTCACAAAATAATTCCAAGTTTTCTGCATTAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTTGAATGTCTCACAAAATAATTCCAAGTTTTCTGCATTAGCAA  300

seq1  CCTAATAGTTGAATCCTGGGATATCCTACAAGATGAAAGTTAACTCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAGTTGAATCCTGGGATATCCTACAAGATGAAAGTTAACTCAATC  350

seq1  AATTATTTTCTCTTTTTATATTAGTTGGCATATAAAAATTTTACATGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTCTCTTTTTATATTAGTTGGCATATAAAAATTTTACATGTGA  400

seq1  ATGGGGTGCTATGAGATAGCTTGTTATATAAATACATTTTATGCTGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTGCTATGAGATAGCTTGTTATATAAATACATTTTATGCTGATTA  450

seq1  AAATAGGGTAATTTTCTTATGCTTACCTTGAATATTTGTTACTTGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGGTAATTTTCTTATGCTTACCTTGAATATTTGTTACTTGTGACA  500

seq1  AGAAGATTAAATCCCTGCCTTCTACCTTTCTTAAATCCCTTCCTTGTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTAAATCCCTGCCTTCTACCTTTCTTAAATCCCTTCCTTGTACC  550

seq1  ATGCTTAAATATACAATAAATGAATATTGATTCTAGGTATTCTACTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAATATACAATAAATGAATATTGATTCTAGGTATTCTACTTACT  600

seq1  ATGACATTCAATACCAGAAATTGTATCTAATGCCTATCTGTAGGACTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTCAATACCAGAAATTGTATCTAATGCCTATCTGTAGGACTATA  650

seq1  TCAGCTTATTACCCTTTCCTCATACACCGTGCCTCAAGTCTCAGGGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTATTACCCTTTCCTCATACACCGTGCCTCAAGTCTCAGGGTCCC  700

seq1  ATCATTTTCCACACATCCTATAAGATGAAATATTTTAAATTCCACCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCCACACATCCTATAAGATGAAATATTTTAAATTCCACCTGTG  750

seq1  GCTAATCTCAATATTTCATTTTACTAAATTCAATGTTCTACAAGATCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTCAATATTTCATTTTACTAAATTCAATGTTCTACAAGATCAGC  800

seq1  AATATTGTTACAAATGACAGGATTTCATATTTTATGAGAAATTTATATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTACAAATGACAGGATTTCATATTTTATGAGAAATTTATATTC  850

seq1  CATGGTATAT  860
      ||||||||||
seq2  CATGGTATAT  860