BAC Information

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BAC

Clone NameB6Ng01-145B09
ChromosomeY (Build37)
Map Location 1,870,359 - 1,870,575
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145B09.bB6Ng01-145B09.g
ACCDH942590DH942591
length1,255240
definitionDH942590|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B09, 5' end.DH942591|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtggagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacaccttgtta
cctcggaatccaactaaacccagtgaatttaattcatctaattgagcaga
agcatctccaatgctaagatctggcacaaggaaaagggaaagaacaaaac
ccttcaaatgtgctggtgcccctctcaccaatttgcgtcttatagagcta
gtgaagggcatatcttctggaccttcccattgtggacaattattctttac
acaatatatccactctagcattgcaatttccctaagtcttaaaatccctt
catcaacactaagccacggaatatcaggcatctccaagtcatttccagta
ggccatcttttgataaacacctcagccaaccattcaaacttttgacacct
tttttaactatgcgagcttccttattaaacctagaatctctactcagagg
acccatgtcaataaactcagcctgctctagttttatgttccttccaccct
tatcccacacccttaaaatccattcccacacatattcaccaggtttctgc
ttgaatgaattagcaaactcattaagctccttagtagtgtagcgaatttc
ctcatggactacactttctacctcccctctaggagcctgttttgctttga
gtctggttacaggtctagaagaaactattggtgggccttgagaaacatca
gtagtgaaagtcattgctggtttatcagactctgcaaaattaatttcctc
atgtggggaaggcattatttcaaggggtggggctgagggtactacttcct
caggtggggcaaacctttgagatctgaagattcaaattctcagcttcaca
tgtctcccatacatccccgtcccatgtgtaggatccattcttgccattag
agcccgtactttaactgtcgacacactctgagctgagactgattcgctgt
agtcagccaactacatggaagtctgttggattctgcaactgagctaatgc
tcagagaagatctctccaagaactgcacttaaatcgtactgtgctggaac
tcgaatttgatacacagcaagctccactctcgtcgttgcacacattagca
gcatg
tttgttcagttctgagccccattccaaggagctaaagggatctgcaaccc
tataggtggaacaacattattaactaaccagtaccccggagctcttgact
ctagctgcatatgtatcaaaagatggcctagtcgaccatcactggaaaga
gaggcccactggacatgcaaactttatattccccagtacaggggaacgcc
agggccaaaaagggggagtcggtgggtaggggagtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870359_1870575
seq2: B6Ng01-145B09.g_98_314

seq1  CCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATTAA  50

seq1  CTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATCAAAAGA  100
      ||||||| |||||| |||||||||||||| |||||||| |||||||||||
seq2  CTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGA  100

seq1  TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACT  150
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  TGGCCTAGTCGACCATCACTGGAAAGAGAGGCCCACTGGACATGCAAACT  150

seq1  TTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTGGGT  200
      |||||| ||||||||||||||||||||||||||||||||||| ||| |||
seq2  TTATATTCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTCGGT  200

seq1  GGGTAGGGGAGTGGGGG  217
      |||||||||||||||||
seq2  GGGTAGGGGAGTGGGGG  217