BAC Information

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BAC

Clone NameB6Ng01-146N14
ChromosomeY (Build37)17 (Build37)
Map Location 573,319 - 573,63977,241,704 - 77,242,037
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146N14.bB6Ng01-146N14.g
ACCDH943885DH943886
length824334
definitionDH943885|Mus musculus domesticus DNA, BAC clone: B6Ng01-146N14, 5' end.DH943886|Mus musculus domesticus DNA, BAC clone: B6Ng01-146N14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,319 - 573,639)(77,241,704 - 77,242,037)
sequence
gaattctatgccctgttcatataaaaacatgtgagtaatttatagtattt
tgctattgccttaatggattctttgaacttctatttggaaatgtttttca
aatgcaaattgacttatttgactacaggaaagctactgccaggttatatg
gaaaaggtttcctttatttcaataagtcagcattttttattagatatttt
cttcatttacatttcaaattctatccctaaatttcctataccctctctcc
accctgttcccctacccacccactcctgcttcttggccgtggcattcccc
tgtactggggcatataaagtttgcaagaccaaggggcctctcttcccaat
gatggccaactaggccatcttctgctacatatgcagcagaagacacgagc
tcttggggtactgattagttcgtattgttgttcaatctatagggttgcag
accccttcagctccttgggtactttctctagctcctccattgcaggccct
gtgttccatccaatagatgactgtgagcatccacttcagtatttgctagg
cactggcatagtctcacacaagatatatcagggtcttttcagcaaaatct
tgctggcatatgcaatagtgtctgggtttggtagccgattatgggatgga
ttcctgggtggggtagtctctggatggtccatcttctcttcttagctcca
aactttgtctgtgtaactcctttcatgggaattttgttcccttttctaag
gagggatgaatatccacatgttggttttccttcttcttgattttcttgtt
tttttttttttttttttttttttt
atcagaaaatatatttttaaatgaaaaatatatgatattgacttatatgc
tgagaacacagaaacaactccgttttcaattaatattgatatactctcag
aactaattagttaaaactgattatgatatcaataatataaacaattatat
tcaaaatattttatgagacttaaagcatttgtagattttcttaaaaaata
gaacttttcaaaagatggcctagtcagccatcactggaaagagaggccca
ttggacatgtaaactttatatgccccagtacaggggaacaccagggccaa
aaagtgggagtggatgggtaggagagtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573319_573639
seq2: B6Ng01-146N14.b_212_541 (reverse)

seq1  CAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAAC  50
      |||||||||||||||||||||||||||||||||| ||||| ||||||| |
seq2  CAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAACC  50

seq1  CTATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGT  99
      |||||||| ||||||||||| ||| ||| ||||| ||  ||||||| |||
seq2  CTATAGATTGAACAACAATACGAACTAATCAGTACCCCAAGAGCTCGTGT  100

seq1  CTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAA  149
      ||   |||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCATCATTGGGAA  150

seq1  GAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAATG  200

seq1  CCAGGGCCAAGAAGTGGGAGAAGGTGGGTAGGGTAGCAAGGCAGGGGGAG  249
      ||| ||||||||||  ||||  ||||||||||| | || ||  | | |||
seq2  CCACGGCCAAGAAGCAGGAGTGGGTGGGTAGGGGAACAGGGTGGAGAGAG  250

seq1  GATATAGGGGACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATAA  299
      | |||| || | ||| ||||||| ||||||||||||||||||||||||| 
seq2  GGTATA-GGAAATTTAGGGATAGAATTTGAAATGTAAATGAAGAAAATAT  299

seq1  CTAATAAAAAAT---------TTAAAATAAA  321
      ||||||||||||         || |||||||
seq2  CTAATAAAAAATGCTGACTTATTGAAATAAA  330

seq1: chr17_77241704_77242037
seq2: B6Ng01-146N14.g_73_406

seq1  ATCAGAAAATATATTTTTAAATGAAAAATATATGATATTGACTTATATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAATATATTTTTAAATGAAAAATATATGATATTGACTTATATGC  50

seq1  TGAGAACACAGAAACAACTCCGTTTTCAATTAATATTGATATACTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACACAGAAACAACTCCGTTTTCAATTAATATTGATATACTCTCAG  100

seq1  AACTAATTAGTTAAAACTGATTATGATATCAATAATATAAACAATTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTAGTTAAAACTGATTATGATATCAATAATATAAACAATTATAT  150

seq1  TCAAAATATTTTATGAGACTTAAAGCATTTGTAGATTTTCTTAAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATTTTATGAGACTTAAAGCATTTGTAGATTTTCTTAAAAAATA  200

seq1  GAACTTTTCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCA  250

seq1  TTGGACATGTAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATGTAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAA  300

seq1  AAAGTGGGAGTGGATGGGTAGGAGAGTGGGGTGG  334
      ||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGAGTGGATGGGTAGGAGAGTGGGGTGG  334