BAC Information

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BAC

Clone NameB6Ng01-147P04
ChromosomeY (Build37)
Map Location 1,544,546 - 1,544,796
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147P04.bB6Ng01-147P04.g
ACCDH944684DH944685
length1,228335
definitionDH944684|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P04, 5' end.DH944685|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctgattggcctcagggcagtcggcttcaaggtccgccctatgcggag
tccccgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaatac
aacaggcatttccggtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacttacaaattaaagaaattgccgagtcggttcgtaaata
cggaaccaatgctaattttaccttggtgcagttagacaggctcgccggca
tggcactaactcctgctgactggcaaacggttgtaaaagccgctctccct
agtatgggcaaatatatggaatggagagcgctttggcacgaagctgcaca
agcgcaggcccgagcaaacgcagctgctttgactccagagcagagagatt
ggacttttgacttgttaacgggtcagggagcttattctgctgatcagaca
aactaccattggggagcttatgcccagatttcttccacggctattagggc
ctggaaggcgctctctcgagcaggtgaaaccactggtcagttaacaaaga
taatccagggacctcaggaatccttctcagattttgtggccagaatgaca
gaggcagcagagcgtatttttggagagtcagagcaagctgcgcctctgat
agaacagctaatctatgagcaagccacaaaggagtgccgagcggccatag
ccccaagaagaacaaaggcttacaagactggctcaagggtctgtcgagag
cttgggggacctctcaccaatgcagcttagcggccgccatccttcatctc
agaaccgctccatgggcagaaataatcagagacatgttttaattgcgaaa
gcctggcattagaagattgcagagctcagataacaggaggactctcactc
tttgctctagtgtgcaagggtatcatagagctgacatgttcgctctgtga
agcattaagcaagtctccccactgaatgtcatcactgaatgtcaacggtc
aatcggcttgtcagccttagattgaaccgttgttctagatccagaaggac
tccaagaagggcacaccatggtaaatga
gaattccaaggatctagcagttgctcagtccgacatgacaagcaggcaaa
aaagtgagagtgagactcccctcttccaatgtccttatatggtctccaga
agaaggtgtagcccacattaaaggtgtgtgccaccacaccttaaatccca
gatgaccttgaactcagagattcccctgtcttaatcttctggaatccata
gccactatgcctcaagatctcaataccaagatccatcacccagcctccag
attagggtcactggtgagccttccaattctggattgtagttcattccaaa
tagagtcaagttgacaaccaggaatagtcactaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544546_1544796
seq2: B6Ng01-147P04.g_180_403

seq1  CCCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGAAAGGTG  50
      |||| ||||||||||||| |||||||||||| ||||||||||||      
seq2  CCCACATTAAAGGTGTGTGCCACCACACCTTAAATCCCAGATGA------  44

seq1  TAGCCCAGATTAAAGGTGTGTTCCTTAAACTCGGAGATTC---------A  91
                            |||| ||||| |||||||         |
seq2  ----------------------CCTTGAACTCAGAGATTCCCCTGTCTTA  72

seq1  ATCTTCTGGAATCCATAGCCACTATGGCTCAAGATCTCCATACCAAGATC  141
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  ATCTTCTGGAATCCATAGCCACTATGCCTCAAGATCTCAATACCAAGATC  122

seq1  CAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCA  191
      |        ||| || ||||||||||| ||||||||||||||||||||||
seq2  C--------ATCACCCAGCCTCCAGATTAGGGTCACTGGTGAGCCTTCCA  164

seq1  ATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAAT  241
      |||| ||||||||||||||||||||||  |||||||||||||||||||||
seq2  ATTCTGGATTGTAGTTCATTCCAAATAGAGTCAAGTTGACAACCAGGAAT  214

seq1  AGCCACTACA  251
      || |||||||
seq2  AGTCACTACA  224