BAC Information

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BAC

Clone NameB6Ng01-148D23
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,565
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D23.bB6Ng01-148D23.g
ACCDH944911DH944912
length1,122494
definitionDH944911|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D23, 5' end.DH944912|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaaactggatctaagaacacataaaaatgatcattcatcat
gatcaagtaggcttcatcccagggatgcagggatggttcaatatacagaa
attcatcaacataatccaatatataaacaaactcaaaggcaaaaaccata
tgatcatctcattagatgcttagaaagcatttggcaaaatccaacacccc
ttcatgataaaagtcttgagaagatcaggaatttaaagcccatatctaag
catagtaaaagcaatatacagcaaaccagtagccaatatcaaactaaatg
gagagaaactggaagcaatcccactaaattctgggactagacaagggctg
tccactctctccatacctattcaatatagaactcaaaatcctagccagag
aacttagaaaacaaaagaaggtcaaagggatgccaatgggaaaggaagaa
gtcaaaatatcgctatttgcagattatatgatcatttacttaaatggcca
caacagttccaccagagaacttctaaatctgataaacaactttagcaaag
tggctggatataaaattatcaaaagataaagaggcagagaaagaacttag
ggaaatggccccctttacaataggcacaaataatataaaataccttggtg
ttactctaaccaagcaagtaaatgatatgtatggcaagaacttcaagtat
ctaaagaaagaaatcaaacatttcagaagatggaaagatcttctgtgctc
atggattggcaggattaatatagtaaaaatagctacactgctaaaagcaa
tctaccgattcaatgtaattcccatcagaatttccaactcaatttatcat
agagttagaaagagcaatttgcaaatttatttggaagaaaataaacccag
gatagagaaaactattctcaacaataaaaaacgtattgggtgaatcacat
ctctgactcaagctgtatacaagcaatagtgttaaaacggcatgttattt
gacaaagacaggcagtagatggtacagattgagaccagaatgacccacac
actatgacacacaactatggtcactgattttgacaagagttaaacatcat
gggaaaagagccgattttgttc
atgaaattcttaggcaaatggattgatctagaaaatatcatcctctacat
ggtccatcctttcatctcagctccaaactttgtctctgccatatccaggg
atccaccccataatcagcatccaaacgctgacaccattgcatacactagc
aagattttatcaaaaggacccagatgtaggtgtctcttgtgagactatgc
cggggcctagcaaacccagaagtggatgctcacagtcagctaatggatgg
atcacagggctcccaatggaggagctagagaaagtacccaaggagataaa
gggatctgcaaccctataggtggaacaacattatgaactaaccagtaccc
cggagctcttgactctagctgcatatgtatcaaaagatggcctagtcggc
catcactggaaagagaggcccattggacacgcaaactttatatgccccag
tacaggggaacgccagggccaaaaagggggagtgggtgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870565
seq2: B6Ng01-148D23.g_346_565

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGATAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGG  220
      ||||| ||||||||||||||
seq2  AGGGGGAGTGGGTGGGTAGG  220