BAC Information

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BAC

Clone NameB6Ng01-149I12
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,573
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149I12.bB6Ng01-149I12.g
ACCDH945847DH945848
length880491
definitionDH945847|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I12, 5' end.DH945848|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagctgaggaaatttgaatggctgagaagcacataaagaaatg
ttcaagatccttagtcatcagggaaattcaaatcaaaaaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaagctcagataaaagaa
gatgctggagaggatatggagaaagaggaacactcctccattgctggtgg
gattgcaagcttgtacaaccactctggaaatcaagttggcggctcctcta
aaaattggacatagtactacctgaggacccagctatactacttctgggca
tatactcagaaattccttcaacatgcaataaggacacatactccactatg
ttcatagtagccatatttttattagatattttctacatttacatgtcaaa
tgctatcccctttgctagtttactctcagaaaatcccctatacccttccc
tgcccccatgctaatcaacccatccaatcatgcttcctggccctggcatt
cccctatactgggacatagaatctttgcaagaccaagggcctctcctccc
gttaatggctgactaggccatcctctgctatatatgcagctagagccatg
agtcccaccatgtgttttctttgattggtggtttagtcccaagtagctct
ggggttactggttaattcatattattgtactcctatagggatgtagaccc
ctccagctcctttgagtactttctctagctccttctttggggaccctgtg
tttcatccattaggtgtcagtgggcattcacctctgtatttgccagccac
tggcatagcctcacaggaatcagctatatcagggtcctgccagcaaatct
tgtctgggtttggtggttgtttatggaatg
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cctattagattatgctgaaaggaccctgatatagctgtctcttgtcagag
tatgcctgggcctagcaaacatagaagtggatgctcacagtcggctattg
gatggatcacatggcccccaatgaaggagctagagaaagtaccaaagaag
ctaaagggatctgcaaccctataggtggaacaacattatgaactaaccag
taccccggagctcttgactctagctgcatatgcatcaaaagatggcctag
tcggccatcactggaaagagaggcccattggacacgcaaactttatatgc
cccagtacaggggaacgccagggccataaaaggggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870573
seq2: B6Ng01-149I12.g_350_561

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCAAAGAAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCATAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTGGG  228
      | ||| ||||||                
seq2  AAGGGGAGTGGG----------------  212