BAC Information

Click to search

BAC

Clone NameB6Ng01-151P19
ChromosomeY (Build37)
Map Location 1,120,574 - 1,120,945
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151P19.bB6Ng01-151P19.g
ACCDH947673DH947674
length9291,185
definitionDH947673|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P19, 5' end.DH947674|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttaggtctgtaccccatttttaatggggttatttatcag
tgagtttataccatgtgtgttcttttgtaattgggttacctcaatcagga
tgatattttctattttttttttgattccccaaattcatgttttttttttc
cattttttattaggtatttagctcatttatatttccaatgctataccaaa
agtcccccatacccacccaaccccactcccctacccacccacttcccctt
tttggccctggcgttcccctgtactggggcatataaagtttgcatgtcca
atgggcctctctttccagtgatggccgactaggccatcttttgatacata
tgcagctagagtcaagagctccggggtactggttagttcataatgttgtt
ccacctatagggttgcagatccctttagctccttgggcactttctctagc
tcctccattgggagccctgtgatccatccattagctgactgtgagcatcc
acttctgtgtttgctaggccctggcatagtctcacaagagacagctacat
ctgggtcctttcgagaaaatcttgctagtgtatgcaatggtgtcagtgtt
tggatgctgattatggggtggatccctggatatggcagtctctacatggt
ccatcctttcatctcagctccaaactttgtctctgtaactccttccatgg
gtgttttgttcccacttctaaggaggggcatagtgtccacacttcagtct
tcatttttcttgagtttcatgtgtttaggaaattgtatcttatatcttgg
gtatcctaggttttgggctaatatccacttatcagtgagtacatattgtg
tgagttcctttgtgaatgtgttacctcactcagatgatgccctcctggat
caggacttcacataaacagagacactgaa
gaattcatgaaattcttaggcaaatgcctggaactacaaaatatcctgag
tgagatatttttataatttacagtgtaaagaaataaatattactaggaat
aagaaagaaacctggaaaatctttttctgttgttgttgttagttcatatt
gatattcacacaaaggaaaatttttctatattctcatattaaaattagag
aaacagactgaaagcagtttttctctttccatttatatgtcgtgaactaa
gaacaattgcagtgcagatatgcattaattaggggaagtttaattattat
cctctatccttattgaaatgtgaaccaattaatcattgtatacacaaatt
agagtttagtcattaaaatataaaatatagatacaaaaaagtgaaacaag
gtcagatatgggagtaggaagaggagtgaaggccagagtgccaagacaat
gaatagagataagcagcctcaggaggtaggagccggtaggaccctctata
aaagtaccagaaacccaggaggtaagacactctaaggactcaattggggt
ggcattagccaaaatgcccaacattgcggagggagaaactcaaagtgtct
aaggtcaataaataggacctcaaacagagggacaggattacaaacccaca
gacaaaatttctaacccagaactgttcctgtctaaaagaactgcagggac
aaaaatgaataagagactgaaggaaaggtggccaaatcctagcccaatct
ggtatccatcccttaagagggcaccaatgcctgacagtattactgatgct
atgctgtgcttacagattagagactggcagaggacctatcagcagctgac
tgtaaaaagcaatacttacacccaaccattgaactgaagtaggtaaccat
attgtgattatgggagggattaaagtagctaaaattttttcttcagtttt
ttattagatattttcttcatttacatttcaaatgctatctcgaaatccta
tgccctaacaccctgtctgccactaccaccactcccacttcctgctctgt
cgtcctatactggcatataagtttgcaagacaggccaacttccactgacc
tagtaagaaatcttgaatggcgacttgtatcacttctcttcatagattcc
atactccaggtattccatccttaggacactccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120574_1120945
seq2: B6Ng01-151P19.b_157_544

seq1  TTTTTTTTTTAA----------------TTTTTTTTTCCATTTTTTATTA  34
      |||||||||| |                ||||||||||||||||||||||
seq2  TTTTTTTTTTGATTCCCCAAATTCATGTTTTTTTTTTCCATTTTTTATTA  50

seq1  GGTATTTAACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATAT  84
      |||||||| |||||||| ||||||||||||||||||||||||||||||| 
seq2  GGTATTTAGCTCATTTATATTTCCAATGCTATACCAAAAGTCCCCCATAC  100

seq1  CCACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGT  134
      ||||||| |||||||||||| |||||||||| ||||||||||||||||| 
seq2  CCACCCAACCCCACTCCCCTACCCACCCACTTCCCCTTTTTGGCCCTGGC  150

seq1  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCT  184
       ||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTCCCCTGTACTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCT  200

seq1  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT  234
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGT  250

seq1  CAAGAGCTCCGGGGTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGG  284
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  CAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGG  300

seq1  TTGGAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGG  334
      ||| ||||||||||||||||||||  ||||||||||||||||||||||||
seq2  TTGCAGATCCCTTTAGCTCCTTGGGCACTTTCTCTAGCTCCTCCATTGGG  350

seq1  AGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCC  372
      |||||| |||||||||||||||||||||||||||||||
seq2  AGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCC  388