BAC Information

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BAC

Clone NameB6Ng01-152B09
Chromosome7 (Build37)Y (Build37)
Map Location 92,725,382 - 92,726,0961,870,346 - 1,870,538
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneFah, Zfand6, 2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70
Downstream geneVmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152B09.bB6Ng01-152B09.g
ACCDH947747DH947748
length1,005494
definitionDH947747|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B09, 5' end.DH947748|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,725,382 - 92,726,096)(1,870,346 - 1,870,538)
sequence
gaattcctggaggtagcaccacttctgatttcaagtgtctctaaaaggct
atagtaataaaggccccattatatttgagtaaaaatagacacattgatca
atataatagaattaaaatgaattatattttcacatatcaatgggcagctg
tagaaaattttgatggtaaatgtttcatgttgtctctgactttattgaaa
ttaaaatgcttttttctttttaattaattaattaattaattaactattca
ttaatctatttacactccagattcaattaccctcccagtccactctctgt
ccattccatatccatattctcctccctgcaccctgtcttcacgatgataa
accatccacacacacccctccccatcagacctctaaattccctagggctt
tcattatcttgagggtcatatgcatcttctctgactctacccagactcag
aagtctgctatataggtgttgggacctcaatcagctggtatatgctgtcc
agttggaactgcattgtttaagagatcttgggggtccagattaattgaga
aggctgatcttcctttagagtcactctcctccgcagcctcttccagcctt
tctccaattcaaccacagtggtaagtaggttctatcctttggttgggtgt
aaatatctgtatctgactctttaagctgcttgttgggtcttttgtggggg
caggaatgatcagttcatttttgtaagcactcaatatccttagaaatagt
atctggccttgggacctccccttgagttggatcctacttccggcctattg
tgggaccctgtcttagtcagggtttctattcctatagaaacatcatgaca
aagaagcaagttggggaagggtttattcggcttaaacttccatactgttg
ttcatcaccaggaagtcaggactgggactcaagcaagtcagaaagcagag
ctaatgcagagagcctggagggatgttcattactggcttgctctcctggc
tgctc
tttgttcagctctgagccccatttttaatggggttatttgattttctgga
gtccaccttcttgagttctttatatatattggatattagtcccctatctg
atttgggataggtaaagatcctttcccaatctgttggtggcctttttgtc
ttattgacggtgtcttttgctttgcagaagctttgcaattttatgaggtc
ccatttatcgattcttgatcttacagcacaagccattgctgttatattca
ggatgatcacagtcagctattggatgggtcacacggcccccaatggagga
gctagagaaattacccaaggagataaagggaactgcaaccctataggtgg
aacaacaatatgaactaaccagtaccccagagctcttgtctctagctgca
tatgtatcaaaagatggcctagtcagccatcactgcaaagagaggcccat
tggacttgcaaactttatatgccccagtacaggggaaagccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92725382_92726096
seq2: B6Ng01-152B09.b_50_764

seq1  GAATTCCTGGAGGTAGCACCACTTCTGATTTCAAGTGTCTCTAAAAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGGTAGCACCACTTCTGATTTCAAGTGTCTCTAAAAGGCT  50

seq1  ATAGTAATAAAGGCCCCATTATATTTGAGTAAAAATAGACACATTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATAAAGGCCCCATTATATTTGAGTAAAAATAGACACATTGATCA  100

seq1  ATATAATAGAATTAAAATGAATTATATTTTCACATATCAATGGGCAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAGAATTAAAATGAATTATATTTTCACATATCAATGGGCAGCTG  150

seq1  TAGAAAATTTTGATGGTAAATGTTTCATGTTGTCTCTGACTTTATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTTTGATGGTAAATGTTTCATGTTGTCTCTGACTTTATTGAAA  200

seq1  TTAAAATGCTTTTTTCTTTTTAATTAATTAATTAATTAATTAACTATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGCTTTTTTCTTTTTAATTAATTAATTAATTAATTAACTATTCA  250

seq1  TTAATCTATTTACACTCCAGATTCAATTACCCTCCCAGTCCACTCTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTATTTACACTCCAGATTCAATTACCCTCCCAGTCCACTCTCTGT  300

seq1  CCATTCCATATCCATATTCTCCTCCCTGCACCCTGTCTTCACGATGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCATATCCATATTCTCCTCCCTGCACCCTGTCTTCACGATGATAA  350

seq1  ACCATCCACACACACCCCTCCCCATCAGACCTCTAAATTCCCTAGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCACACACACCCCTCCCCATCAGACCTCTAAATTCCCTAGGGCTT  400

seq1  TCATTATCTTGAGGGTCATATGCATCTTCTCTGACTCTACCCAGACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCTTGAGGGTCATATGCATCTTCTCTGACTCTACCCAGACTCAG  450

seq1  AAGTCTGCTATATAGGTGTTGGGACCTCAATCAGCTGGTATATGCTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCTATATAGGTGTTGGGACCTCAATCAGCTGGTATATGCTGTCC  500

seq1  AGTTGGAACTGCATTGTTTAAGAGATCTTGGGGGTCCAGATTAATTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAACTGCATTGTTTAAGAGATCTTGGGGGTCCAGATTAATTGAGA  550

seq1  AGGCTGATCTTCCTTTAGAGTCACTCTCCTCCGCAGCCTCTTCCAGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATCTTCCTTTAGAGTCACTCTCCTCCGCAGCCTCTTCCAGCCTT  600

seq1  TCTCCAATTCAACCACAGTGGTAAGTAGGTTCTATCCTTTGGTTGGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATTCAACCACAGTGGTAAGTAGGTTCTATCCTTTGGTTGGGTGT  650

seq1  AAATATCTGTATCTGACTCTTTAAGCTGCTTGTTGGGTCTTTTGTGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTGTATCTGACTCTTTAAGCTGCTTGTTGGGTCTTTTGTGGGGG  700

seq1  CAGGAATGATCAGTT  715
      |||||||||||||||
seq2  CAGGAATGATCAGTT  715

seq1: chrY_1870346_1870538
seq2: B6Ng01-152B09.g_375_567

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||| ||||||||||| |||||||| |||||||||||||||||||
seq2  CTAGAGAAATTACCCAAGGAGATAAAGGGAACTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| ||||||||||||| |||||| ||||||||| |||| |||||||
seq2  ACAACAATATGAACTAACCAGTACCCCAGAGCTCTTGTCTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCAGCCATCACTGCAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGG  193
      |||| ||||||||||||||||||||||||||||||| ||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAAGCCAGG  193