BAC Information

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BAC

Clone NameB6Ng01-153K23
ChromosomeY (Build37)6 (Build37)
Map Location 1,870,501 - 1,870,5664,605,106 - 4,605,225
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153K23.bB6Ng01-153K23.g
ACCDH948925DH948926
length281120
definitionDH948925|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K23, 5' end.DH948926|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,870,501 - 1,870,566)(4,605,106 - 4,605,225)
sequence
ttaaccgaggaataccgaatggctgagaagcacctgaaaaaatgttcaat
gtccttaatcatcagggaaatgaaaatcaaaacaaccttgagattccacc
tcacaccagtcagaatcactaagatcaaaaattcaggtgacagcagatgc
tggcaaggatgtagagaaagaggaacactccttcattgttgatgggattg
caagcccctttgtattgcaaactttatatgccccagtacaggggaacgcc
agggtcaagaagtgaaagtgggtgggtaggg
tttaaaggaaaatgacattttagtagtgggggtcattgggcctgttaaac
tacacttatcaatttgcatttctcatcataaaattctggttcccttcctt
ccttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870501_1870566
seq2: B6Ng01-153K23.b_265_330

seq1  TGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGG  50
      ||||||||||||||||||||||||||||||||||||||| ||| ||| | 
seq2  TGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGTCAAGAAGTGA  50

seq1  CAGTGGGTGGGTAGGG  66
       |||||||||||||||
seq2  AAGTGGGTGGGTAGGG  66

seq1: chr6_4605106_4605225
seq2: B6Ng01-153K23.g_75_194

seq1  TTTAAAGGAAAATGACATTTTAGTAGTGGGGGTCATTGGGCCTGTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGAAAATGACATTTTAGTAGTGGGGGTCATTGGGCCTGTTAAAC  50

seq1  TACACTTATCAATTTGCATTTCTCATCATAAAATTCTGGTTCCCTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTATCAATTTGCATTTCTCATCATAAAATTCTGGTTCCCTTCCTT  100

seq1  CCTTCCTTCCTTCCTTCCTT  120
      ||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTT  120