BAC Information

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BAC

Clone NameB6Ng01-157J06
ChromosomeY (Build37)1 (Build37)
Map Location 573,321 - 573,390110,758,638 - 110,759,169
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157J06.bB6Ng01-157J06.g
ACCDH951772DH951773
length500639
definitionDH951772|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J06, 5' end.DH951773|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,390)(110,758,638 - 110,759,169)
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacgatggtgtcttttgctttgcagaagctttgcaatt
ttatgaggtcccatttatcgattcttgatcttacagcacaagccattgct
gttctattcaggaattttccccctgtacccatatctttgaggcttttccc
tactttctcctctataagtttcagtgtctctggttttatgtggagttcct
taatccacttagatttgaccttagtacaaggagatagtggatgatcacag
tcagctattggatgggtcacacggcccccaatggaggagctagagaaatt
acccaaggagctaaagggaactgcaaccctataggtggaacaacaatatg

gaattcctgatctttcctatattttagtgaggtaaccaaagcacaaaaga
acacacataatatatatactcagtgataagtggatattaaccccaaagcc
cataatgcccatgatacaacccacagaccatatggatattgggaagaaga
aatactgggatgtggatgcttcagtactgcaatgaagagggaacagactg
ctattaggagttagagggagggaggcctgggagggagagaatagggtgat
aaaataaggtggaaaggatcaggtacaagagggaacaggagagaggtata
gagggtaaagaaatcaaatacaaatatgtaacagtgagggaatgaggaac
agctgtagttccctttaaagagagggaacatatgagatttgtgattctag
ggtttggggtttgtgttttgttcattctctatgatcttttcttttccctt
tcattgacattcaaagttcatgatcttattgttcagtacattttttccac
agtgtacctgtacctaaattacattatctcttcatcatttgaagaaaatt
gggaaattttcccctcctatgactttaactaaaggagcactgaatttatg
tattttagaataaatgtgtatatatgttatgagtgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573390
seq2: B6Ng01-157J06.b_477_546

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||| |||||||||||||||||||| |||||| |||
seq2  ATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCT  50

seq1  ATAGATGGAACAACAATATG  70
      |||| |||||||||||||||
seq2  ATAGGTGGAACAACAATATG  70

seq1: chr1_110758638_110759169
seq2: B6Ng01-157J06.g_169_703

seq1  ATGCCCATGATACAACCCACAGACCATATGGATATTGGGAAGAAGAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATGATACAACCCACAGACCATATGGATATTGGGAAGAAGAAATA  50

seq1  CTGGGATGTGGATGCTTCAGTACTGCAATGAAGAGGGAACAGACTGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGTGGATGCTTCAGTACTGCAATGAAGAGGGAACAGACTGCTAT  100

seq1  TAGGAGTTAGAGGGAGGGAGGCCTGGGAGGGAGAGAATAGGGTGATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTTAGAGGGAGGGAGGCCTGGGAGGGAGAGAATAGGGTGATAAAA  150

seq1  TAAGGTGGAAAGGATCAGGTACAAGAGGGAACAGGAGAGAGGTATAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGAAAGGATCAGGTACAAGAGGGAACAGGAGAGAGGTATAGAGG  200

seq1  GTAAAGAAATCAAATACAAATATGTAACAGTGAGGGAATGAGGAACAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAATCAAATACAAATATGTAACAGTGAGGGAATGAGGAACAGCT  250

seq1  GTAGTTCCCTTTAAAGAGAGGGAACATATGAGATTTGTGATTCTAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCCCTTTAAAGAGAGGGAACATATGAGATTTGTGATTCTAGGGTT  300

seq1  TGGGGTTTGTGTTTTGTTCATTCTCTATGATCTTTTCTTTTCCCTTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTGTGTTTTGTTCATTCTCTATGATCTTTTCTTTTCCCTTTCAT  350

seq1  TGACATTCAAAGTTCATGATCTTATTGTTCAGTACATTTTTTCCACAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTCAAAGTTCATGATCTTATTGTTCAGTACATTTTTTCCACAGTG  400

seq1  TACCTGTACCTAAATTACATTATCTCTTCATCATTTGAAGAAAATTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTACCTAAATTACATTATCTCTTCATCATTTGAAGAAAATTGGGA  450

seq1  AA-TTTCCCCTCCTATGACTTTAACTAAAGGAGCACTGAATTTATGTA-T  498
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATTTTCCCCTCCTATGACTTTAACTAAAGGAGCACTGAATTTATGTATT  500

seq1  TTAGAATAAATGTGTATATATG-TAGGAGTGTTTG  532
      |||||||||||||||||||||| || |||||||||
seq2  TTAGAATAAATGTGTATATATGTTATGAGTGTTTG  535