BAC Information

Click to search

BAC

Clone NameB6Ng01-159F24
ChromosomeY (Build37)
Map Location 1,494,292 - 1,494,383
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
Downstream geneUbe1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159F24.bB6Ng01-159F24.g
ACCDH953055DH953056
length9421,154
definitionDH953055|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F24, 5' end.DH953056|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttcttgtggctgtcttcttttagtttagttgaaggatcattt
tcttgttttttctaggacatagtttccgtccttttttttttttttttttt
gttttgtttttgtttttttttgttttgttttgttttgtttttttgtttgt
ttgtttttgtttttgtttttgtttttttttttctgttattatcctttgaa
gggctggattcctggaaagataatatgtgaatttggttaggtcgtggaat
actttggtttctccatctacagtaattgaaagtttggctgggaagagtag
cctgtgctggcacttgtgttctcttagtgtctgtataacatctgtccaga
atcttcttgttttcatagtctctggtgaaaaatctggtgtaattctgata
ggcttgcctttatatgttacttgaccattttcccttactgcttttaatat
tctatcttcatttactgcatttgttgttttgattattatgtgtctggagg
aatttcttttctggtctagtctatatggagttctgtaggcttcttttatg
ttcatgggcagatttctttaggtttgggaagttttcttctataattttgt
tgaagatatttgctggtcctttgagatgaaaatcttcattctcatctact
cctattatctgtaggtttggtcttctcattgtgtcctggatttcctggat
gttttgagttaggatctttttgtattttgtattttcttagattgttgtgc
agatgttctctatggaatcttctgcacctgagattctctcttccatctct
tgtattctgttgctgatgctcaccatctatggctccagaatttctttcct
agggtttctatctccagcgttgcctcactttgggttttctttaatgtgtc
tacttcccttttaggtctggtatggttgttcatttccatcat
gaattctttgtttatctctggaccccatttttaacagggttatttggttc
tctgaagtataatttcttgagttctttgtatatgttggacagtatccaaa
ttaacaaaatcagaaatgaaagtggacacctaacaatagaaagtgagaaa
acccaaaataccatcagatcctactacaaaagcatatactcaacaaaact
ggaaaacctggataaaattgataattttctagacagataccaggaaccaa
agttaaatcaggatcatattaatggtctaaacagtcccttatgctctaaa
gaaatagaagcagtcattaatagtctcccaacaacaacaacaacaacaac
aaaaacaaaaacaaaacaacaacaacaacaacaaaaccccaaaaaacaaa
agtttaggacaagatgggtttactgcagagttttatcagatcttcaaaaa
agagctcacaccaatactcctcaaactattccacaaaatagaaacagaag
gaacactacccaattcgtcctatgaaaccactattactctcatatttaga
ccacacaaaggctcaacaaagaaaaataacttcagaccaattttctttat
gaatattgatggaaaaattactcaataaaattctcacaaattgaaatcca
agaacacatccaaatgatcatccatcatgatcaagtaggcttcattccag
ggatgcagggatggtttaatatttggaaatccatcaacataatccactat
ataaacaaacccaaagggtggggggggaggaaacacttgatcatgtcatt
agatgctggggaaagcatttgacaaaacaacaagccttggatgataaaaa
tctggaaagatcaggaattcaaggcccatacctaaacatgtaaagcaata
tacatcatacctgtagcacatcaaataaatggagagacttgaagcatctc
actaaatggggactagacagcatcactctctccctatgtatgagtaagta
ctcgagtctagcacagcagtagataacaaatggtctaagcatatgacaat
aggtaggaagagacaaaatttactattgcagtcaatggaaatatgaattc
cgaaatcgacgagaatctgacctgatacctaccaaaggtggccgggaact
atat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1494292_1494383
seq2: B6Ng01-159F24.b_123_185

seq1  TTTTTTTTTTTTTTTTTTTGGTTTTAGAACTTTTTAGGGTGTTTTTAGCG  50
       |||||||||||||||||| ||||               |||||||    
seq2  -TTTTTTTTTTTTTTTTTTTGTTT---------------TGTTTTT----  30

seq1  TTCTTATGGGTTTTTTTTTGTTTTGTTTTGTATTGTTTTTTT  92
               |||||||||||||||||||||| ||||||||||
seq2  ---------GTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTT  63