BAC Information

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BAC

Clone NameB6Ng01-159M04
ChromosomeY (Build37)
Map Location 248,299 - 248,460
singlet/doubletsinglet
Overlap geneJarid1d
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3
Downstream geneEif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159M04.bB6Ng01-159M04.g
ACCDH953329DH953330
length1,155984
definitionDH953329|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M04, 5' end.DH953330|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgggaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgatagc
agatgctggcaaggatgtgaggaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaacccctctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatcccacaatacctctgttgggc
acatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttattataatagccagaagctggaaagaatccagatg
cccctcaagagaggaatggatacagaaaatgtggtacatttacgcaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
tagaatacccaggatataagatccaatttgtaaaacacatgaaactcatg
aagaacgaacaccaaggtgtggacactttgccccttcttaaaattgggaa
caaaacaccaatggaaggtgttacagagtcaaagtttggagctgagacga
aaggatggaccatctagagactgccttatccagggatccaccccataatc
agcttctaaatgctgacaccattgcatatactagcaagattttgctgaaa
gtaccctgttatagctgtctcttgtgaggctcttcttgggcctagcaaac
acagaagtggatgctcatagtcagctattggatggacacaggccccatgg
agagctagagaagtacctaggagctaagtgatctgcaccctataggtgga
cacatttgagtacagtaccctggagctagtctctagctgctttgtttcag
aagatgctagtcagccatcagtgaagagagtcatgttgcaacctttatgc
ctaggtacaggggaagccaggtcagaagttgaataaagaggggaggagaa
gatgt
gaattctttctttagctctgtaccccatttttaatagagttatttggttt
ttctggagtccaacttcttgagttctttatatatattgaatattagtcca
atattagtcccctatcagatttaggattggtaaaaaccctttaccaatct
gttggtggcctttctgtctttttttgtttgtttgtttgtttgttttgaga
catggtttctctgtgtagccctggtatcctggaactcactctgtagacca
ggctgaccttgaactcagaaattcacctgcctttgcttcacaagtgctgg
gattaaaggcatgcgccaccatgcccagctaggcctttttgttttattga
ctgtggtttttgccttacagaagctttgcaattttatgaggtcccatttt
tcgatgcttgatcttacagcacaaatttcagagctgagatggaatgaagg
acaatccagagactgcctcacccggggatccatcccataaactcttacac
gcgttctcgcgaccggccaggaagaacgcaacaaaccggaatcttctgcg
gcaaagctttattgcttacatcttcaggagccagagcgcaagagagcaag
agagcaagagtgcaagcactttattgcttacatctttaggagccagagcg
caagagagcaagagtgcaagagtgcaagagtgcaaaaggcgaaaccccgt
ccctttttaaggagaattattctccgcctaggacgtattactccctgatt
ggctgcagcccatcggccgagttgtcgtcacggggaaggcagagcacatg
gagtgaagaactacccttggcacatgcgcagattatttgtttaccactta
gaacacaggatgtcagcgccatcttgcaacggcaaatgtgagggcggctc
cccacataaacactaccaaacccagacactattgcatatgccagcagatt
tgctgacaggacctgatatagctagctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_248299_248460
seq2: B6Ng01-159M04.g_242_399

seq1  TTTGTTTGTGCTTGTTTGTTTGTTTCGAGATAGGGTTTCTCTGTGTAACC  50
      |||||||||  |||||||||||||| |||| | |||||||||||||| ||
seq2  TTTGTTTGT--TTGTTTGTTTGTTTTGAGACATGGTTTCTCTGTGTAGCC  48

seq1  CTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGA  100
      |||| | |||||||||||||| |||||||||||||| ||| |||||||||
seq2  CTGG-TATCCTGGAACTCACTCTGTAGACCAGGCTGACCTTGAACTCAGA  97

seq1  AATCCACCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGAGTGCGCCAC  150
      ||| ||||||||| |||||| |||||||||||||||||||  ||||||||
seq2  AATTCACCTGCCTTTGCTTCACAAGTGCTGGGATTAAAGGCATGCGCCAC  147

seq1  CACTGCCCAGCT  162
      || |||||||||
seq2  CA-TGCCCAGCT  158