BAC Information

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BAC

Clone NameB6Ng01-163L14
ChromosomeY (Build37)
Map Location 573,321 - 573,499
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163L14.bB6Ng01-163L14.g
ACCDH956238DH956239
length1,098490
definitionDH956238|Mus musculus domesticus DNA, BAC clone: B6Ng01-163L14, 5' end.DH956239|Mus musculus domesticus DNA, BAC clone: B6Ng01-163L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataacgaatgcctgagaagcactttaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtcacagc
agatgctggccaggatgtggggaaagaggaatactcctccattgttggag
gaattgcaagcttgtataaccactctggaaatcattctggtggtttctca
gaaaattggacatagtactacctgaggatcccgcaatacctctcctgggc
aaatatccagaagatgttccaattggtaataaggacacatgctccactat
gttcatagcagccttatttataatagtcagaaggtggaaagaacccagat
gcccctcaatattggaatggatacagaaaatgtggtacatttacacagtg
gagtagtactcagctattaaaaatgaatttatgaaattgctaggcaaatg
gatggacctggagggcatcatcctgagtgagataacccaatcacaaaaga
actcacatgatatgtactcactgataagtggatattagcccagaaactta
ggatacccaagatataagattcaattttgtaaaacacatgaaactccaaa
agaacaaagaccaaagtgaggacattttttccccttctcagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatacacaggggacccatcccataat
ccccctccaaatgctgacaccattgcatacactagcaagagttttgctga
aaggaccctgatatagctctctcttgtgaggctattctttggcctagcaa
acacagaaatggatgctcacagtcagctattgggatggatcgcaggttcc
tcaatggaggagctagagaagtaccaaggaactaaagggatctgcaaccc
ttataggtgggaaccattatgaactaaccacatccaccttggaagctcgt
gtctcttagctgatagtgttccaaagtataggtcctatttggcctcta
tttacgaagaccaaagtgtgggcactttgccccttcttagaattgggaac
aaaacacccacggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagaatgccatatccagggatccatcccatatcag
cccccaaacgctgacaccattgcatacactagcaagattttgctgaaagg
accctgatatagttgtctcttgtgaggctatgccagggcctaacaaacac
agaagtggatgctcacagttacctattggatggattacagggcccccaat
gaaggagctagagaaagtacccaaggagctaaagggatctgcaaccctat
aggtggaacaacaatatgaactaaccagtacccccacccccacctccgga
gctcttgtctctagctgcatatgtatcagaagatggcctagtcagccatc
agtggaaagagaggcccattggtcttgcaaactttttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573499
seq2: B6Ng01-163L14.g_371_562

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACA------------  87
      |||| ||||||||||||||||| ||||||||| || ||            
seq2  ATAGGTGGAACAACAATATGAACTAACCAGTACCCCCACCCCCACCTCCG  100

seq1  GAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCA  137
      |||||| |||||||||||||||||||||||||||||||||||||  ||||
seq2  GAGCTCTTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCAGCCA  150

seq1  TCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATG  179
      ||| ||| ||||||||||| ||||||||||||||||| ||||
seq2  TCAGTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTTTATG  192