BAC Information

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BAC

Clone NameB6Ng01-165O20
ChromosomeY (Build37)
Map Location 1,120,962 - 1,121,081
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165O20.b
ACCDH957851
length740
definitionDH957851|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O20, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgaaggtagatatcaactacccaaatatcccaatttaaaaaat
ggggtaaaaggataaataaaatatttatcaacagaagaagcacccagaga
aatattaaaagtctttagtcatcagggaaatgaaaatcaaataactcggg
ggttccatcctttactcattagaatggttaagatcaaaatcacaagtaat
agcacatactgataagaatgtagagcaaagggaacactcctccattgctt
gtaggagtgcaaacttttacaccacttttgaaatcaatttggttgtttct
caaaagtttgcagctgtgacaaagaatggaccacctatagactgccatat
ccagggatccaccccataatcagcttctaaacgctgacaccattgcatac
actaacaagattttgctgaaaggtcccagatatagctgtctcttgtgaga
ctaagtcggggcctatcaaacacagaaatagatgctcacagtcagctatt
ggatggatcacagggctcccaatggaggagctagagaaagtacccaagga
gctaaagggatctgcaaccctataggtggaacaacattctgaactaacca
gtaccccggagctcttgactatagctgcatatgtatcaaaagatggccta
gtcggccatcactggaaagagaggcccattggacaagcaaactttatatg
gctcagtacaagggaacgccagggccaaaaaatgggaatg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120962_1121081
seq2: B6Ng01-165O20.b_391_510 (reverse)

seq1  GGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGCCTCCTTTCAATA  50
      ||||||| | ||||||||||||||||||||| |||||   |||||||  |
seq2  GGCCCCGACTTAGTCTCACAAGAGACAGCTATATCTGGGACCTTTCAGCA  50

seq1  AAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGG  100
      |||||||| |||||||||||||||||||||||||| || |||||||||||
seq2  AAATCTTGTTAGTGTATGCAATGGTGTCAGCGTTTAGAAGCTGATTATGG  100

seq1  GGTGGATCCCTGGCTATGGC  120
      ||||||||||||| ||||||
seq2  GGTGGATCCCTGGATATGGC  120