BAC Information

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BAC

Clone NameB6Ng01-166L24
ChromosomeY (Build37)
Map Location 1,120,586 - 1,120,669
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166L24.bB6Ng01-166L24.g
ACCDH958438DH958439
length9731,085
definitionDH958438|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L24, 5' end.DH958439|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtccaccaaaccaaacctacaaagaatactggaaacaacact
ttaaaatgaggagagggataaacacagcaaaaacaatttcaatgaaaatt
atattatagttactgagatactaactagggtcatgcatacaaaacagaaa
aacaatagtcaaacaacgtcaacacttatcttttaataaaatattaaatg
tccattgtcttgatccttttaacaaataatatgtgtatgctgaatggatt
aagaataaaaaatatacaggaaggatactgatttatctgagttaatttta
tatctggtcacgttgctgaaattgtttataagctggagaagttctctggt
agaatttttggggttgcttatgtatgctatcataccatttgcaaatagtg
atacctttatttcttctttttttttccattttttattaggtatttagctc
atttacatttccaatgctataccaaaagtcccccatacccaccaaccccc
actcccctacccacccactccccctttttggccctggcgttcccctgtac
tggggcatacaaagtttgcatgtccaatgggcctctctttccagtgatgg
ccgattaggccatcttttgatacatatgcagctagagtcaagagctccgg
ggtactggttagttcataatgttgttccacctatagggttgcagatccct
ttagctccttgggtttttctctagctcctccattgggagccctgtgatcc
atccattagctgactgtgagcatccacttctgtgtttgctaggccccggc
atagtctcacaagagatagctacatctgggtcctttcaataaaatcttgc
tagggtatgcaatggtgtcagcgtttggatgctgattatggggtggatcc
ctggatatggcagtctctacatggtccattctttcatctcagctccaaac
tttgtctctgtaactcttccatg
gaattcctgatctttccatgacttttatcatgaatgggtgttggattttg
tcaaaaaatttctctgcatctaatgagatgatcatgtgatttttgtcttt
gagtttgtttatatagtggattacattgatggatttctgtatattaaaaa
aatctctgcatccctgggataaatcctacttggtcatgatggataagcgt
tttgatgtgttcttggattcggtttgcaaggattttattgagtatttttg
catcgatatgcataagggaaattcatctgaagttctctttctttgttgga
tctttgtgtggtttagatatcacagtaattgtgggttcatagaatgaatt
gggtatagtaccctctgtttctattttgtggagtagtttgaggatagttg
gaactaggtcttctttgaaggtctgatagaactctccactactcccatct
ggttctcggctttttttttcgttgggagactattaatgactgcttgtatt
tctttaggggaaatgggaccattaacattgttaatctgatcctattttaa
ctttggtacacggaatctgtctaggaagttgtccatttcatccttgtttt
ccagttttgttgagtatagccctttgtagcatgatctgatgatgttttgc
atttcctcagaatcagtttttatgtcttctttttcatttctgattttctt
aattaggatactgtccctgtgccctctagttagtctggctaagggtttat
ctatcttgttgattttctcaaaggatcagctcctggtttggttgatcctt
ttgaatagttctttttctttccacttggttgatttcagccccaagtttga
ttatttcctgaagtctactcctcttgggtgaatttgcttctttttgttct
agagcttctaggtttctgtcagactgctagtgtatgctctctctagtttc
tttttctttttctttttttatgtcacctcaaggctatgagttttccctct
aggactggctttattgtgtctcataaagtttgggatggttgggtgttttt
ctataaatctgaaagcgtctatgctctctgcttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120586_1120669
seq2: B6Ng01-166L24.b_458_541

seq1  TTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAATG  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATG  50

seq1  CTATACCAAAAGTCCCCCATATCCACCCACCCCC  84
      ||||||||||||||||||||| ||||| ||||||
seq2  CTATACCAAAAGTCCCCCATACCCACCAACCCCC  84