BAC Information

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BAC

Clone NameB6Ng01-167F23
Chromosome14 (Build37)Y (Build37)
Map Location 97,617,683 - 97,618,8111,120,659 - 1,120,705
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167F23.bB6Ng01-167F23.g
ACCDH958890DH958891
length1,16147
definitionDH958890|Mus musculus domesticus DNA, BAC clone: B6Ng01-167F23, 5' end.DH958891|Mus musculus domesticus DNA, BAC clone: B6Ng01-167F23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(97,617,683 - 97,618,811)(1,120,659 - 1,120,705)
sequence
gaattcacggcccatacctaaacattataaaagcaatttactgcaaacca
acagccaagatcaaagtaaatggagagatacttgaagcaatcccactaaa
atcccggggttagacaatgatgcacactctctccatatctactcattata
gtatgtaaagtgctagttagaacaataagacaacaaaaagagatcagctg
gatacaattggcaaagaagaaataaaggtatcactattatcactccagct
gataaacaacttcagcaaagtggccggataggaaattaactcaaataaat
cagtagccttctttgataaaaaatgataaacaggctgagaaagaaattag
ggaaataacccccttcaccatagttacaaataatataaaatatcttgggg
taactctaacaagtgaaagatctgtatgacaataacttcaagtctcccaa
gaaagaacttgaagatgatttcagaaaatggagagatcttccatgctcat
gaattggcagaaataacatagtaaaaatagccatcctaccaaagggattt
gccttattgttaacggttttctttagaatttttggtttatgggtgctatt
tatgtatcagatttaaatatgattaaatatgatgggagagctgaaaaaca
tcttatattagcatgaggcagttataactttatatcccagaaatatttat
gacttttccttcactgatgaaatatacaggtcagtaaatatgtcatgttt
tgtagtatttggtttcaagcaaataatccaaattacttctgggttataca
ttctgtacaggtatttgccccttgctgtttgtccagtacttttatagaga
gtaaaaactatggatactttaagccccatttatataaagtgacaagtatt
tgcatctaagctacacatatccctacatatacattaattgcagtctagat
ttcctataatgcctaatacagatttgtctggtatgtggtaccaaagtagg
aaaatgtctgatgtgtaatgctgatatctacaaattctgtatggtttcag
tgtttgttctggtgttatcacacttcatcttgcataggtaaaaattcaac
tgcaagcaaagctgtgctgacaaggccaaatgtgtgatggtgaggaagag
tacaatggcag
cagggccaaaaagggggagtgggtgggcaggggagtgggggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97617683_97618811
seq2: B6Ng01-167F23.b_92_1199

seq1  GCCAAGATCAAAGTAAATGGAGAGATACTTGAAGCAATCCCACTAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGATCAAAGTAAATGGAGAGATACTTGAAGCAATCCCACTAAAATC  50

seq1  CCGGGGTTAGACAATGATGCACACTCTCTCCATATCTACTCATTATAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGTTAGACAATGATGCACACTCTCTCCATATCTACTCATTATAGTA  100

seq1  TGTAAAGTGCTAGTTAGAACAATAAGACAACAAAAAGAGATCAGCTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTGCTAGTTAGAACAATAAGACAACAAAAAGAGATCAGCTGGAT  150

seq1  ACAATTGGCAAAGAAGAAATAAAGGTATCACTATTATCACTCCAGCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGGCAAAGAAGAAATAAAGGTATCACTATTATCACTCCAGCTGAT  200

seq1  AAACAACTTCAGCAAAGTGGCCGGATAGGAAATTAACTCAAATAAATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTTCAGCAAAGTGGCCGGATAGGAAATTAACTCAAATAAATCAG  250

seq1  TAGCCTTCTTTGATAAAAAATGATAAACAGGCTGAGAAAGAAATTAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCTTTGATAAAAAATGATAAACAGGCTGAGAAAGAAATTAGGGA  300

seq1  AATAACCCCCTTCACCATAGTTACAAATAATATAAAATATCTTGGGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCCCCTTCACCATAGTTACAAATAATATAAAATATCTTGGGGTAA  350

seq1  CTCTAACAAGTGAAAGATCTGTATGACAATAACTTCAAGTCTCCCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACAAGTGAAAGATCTGTATGACAATAACTTCAAGTCTCCCAAGAA  400

seq1  AGAACTTGAAGATGATTTCAGAAAATGGAGAGATCTTCCATGCTCATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTGAAGATGATTTCAGAAAATGGAGAGATCTTCCATGCTCATGAA  450

seq1  TTGGCAGAAATAACATAGTAAAAATAGCCATCCTACCAAAGGGATTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGAAATAACATAGTAAAAATAGCCATCCTACCAAAGGGATTTGCC  500

seq1  TTATTGTTAACGGTTTTCTTTAGAATTTTTGGTTTATGGGTGCTATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTAACGGTTTTCTTTAGAATTTTTGGTTTATGGGTGCTATTTAT  550

seq1  GTATCAGATTTAAATATGATTAAATATGATGGGAGAGCTGAAAAACATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGATTTAAATATGATTAAATATGATGGGAGAGCTGAAAAACATCT  600

seq1  TATATTAGCATGAGGCAGTTATAACTTTATATCCCAGAAATATTTATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGCATGAGGCAGTTATAACTTTATATCCCAGAAATATTTATGAC  650

seq1  TTTTCCTTCACTGATGAAATATACAGGTCAGTAAATATGTCATGTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCACTGATGAAATATACAGGTCAGTAAATATGTCATGTTTTGT  700

seq1  AGTATTTGGTTTCAAGCAAATAATCCAAATTACTTCTGGGTTATACATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGTTTCAAGCAAATAATCCAAATTACTTCTGGGTTATACATTC  750

seq1  TGTACAGGTATTTGCCCCTTGCTGTTTGTCCAGTACTTTTATAGAGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGGTATTTGCCCCTTGCTGTTTGTCCAGTACTTTTATAGAGAGTA  800

seq1  AAAACTATGGATACTTTAAGCCCCATTTATATAAAGTGACAAGTATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATGGATACTTTAAGCCCCATTTATATAAAGTGACAAGTATTTGC  850

seq1  ATCTAAGCTACACATATCCCTACATATACATTAATTGCAGTCTAGATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGCTACACATATCCCTACATATACATTAATTGCAGTCTAGATTTC  900

seq1  CTATAATGCCTAATACAGATTTGTCTTGGTTATGTGGGTACCAAAGGTAG  950
      ||||||||||||||||||||||||||  | ||||| ||||||||| ||||
seq2  CTATAATGCCTAATACAGATTTGTCT--GGTATGT-GGTACCAAA-GTAG  946

seq1  GAAAATGTCTGGATGTGGTTAATGCTGATATTCTACAAATTCTTGTTATG  1000
      |||||||||| ||||||  ||||||||||| ||||||||||||   ||||
seq2  GAAAATGTCT-GATGTG--TAATGCTGATA-TCTACAAATTCT--GTATG  990

seq1  GTTTCAGTGTTTGTTCTGTGTTTATCACACTTTCCATCTGCAATAAGGTA  1050
      ||||||||||||||||||   |||||||||||  |||||   || |||||
seq2  GTTTCAGTGTTTGTTCTGGTGTTATCACACTT--CATCTTGCAT-AGGTA  1037

seq1  AAAAATCAACTGGCAAAAGCACAAGCTGTGGCTGGACAAGGGCAAATGTG  1100
      |||| |||||||    ||||| ||||||| ||| ||||||| ||||||||
seq2  AAAATTCAACTG---CAAGCA-AAGCTGT-GCT-GACAAGGCCAAATGTG  1081

seq1  TGATTGTGAGGAAAGAGTTACAATGGCAG  1129
      |||| |||||| ||||| |||||||||||
seq2  TGATGGTGAGG-AAGAG-TACAATGGCAG  1108

seq1: chrY_1120659_1120705
seq2: B6Ng01-167F23.g_70_116 (reverse)

seq1  CACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTG  47
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTG  47